RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 PRKAR1BP31321 381 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 SUCLG1P53597 346 aaKnown RBP16.75■□□□□ 0.27
DDR1-236ENST00000431373 EPS8Q12929 822 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 INTS11Q5TA45 600 aaKnown RBP16.75■□□□□ 0.27
DDR1-236ENST00000431373 C8orf82Q6P1X6 216 aaPredicted RBP16.75■□□□□ 0.27
DDR1-236ENST00000431373 ERICH5Q6P6B1 374 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 DHRS4L2Q6PKH6 230 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 CHMP1BQ7LBR1 199 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 ZNF550Q7Z398 422 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 MRGPRGQ86SM5 289 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 GGNQ86UU5 652 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 ZNF808Q8N4W9 903 aaPredicted RBP16.75■□□□□ 0.27
DDR1-236ENST00000431373 ITLN2Q8WWU7 325 aaPredicted RBP16.75■□□□□ 0.27
DDR1-236ENST00000431373 REXO5Q96IC2 774 aaKnown RBP16.75■□□□□ 0.27
DDR1-236ENST00000431373 ZNF583Q96ND8 569 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 CALHM2Q9HA72 323 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 COQ3Q9NZJ6 369 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 TAGLN3Q9UI15 199 aa16.75■□□□□ 0.27
DDR1-236ENST00000431373 CLCA1A8K7I4 914 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 FAM220BPB1ANY3 271 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 KDM4EB2RXH2 506 aaPredicted RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 H0YC42 278 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 NDUFAB1O14561 156 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 GKN3PP0CG01 181 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 IL11P20809 199 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 IDH2P48735 452 aaKnown RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 TPD52P55327 224 aaPredicted RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 DLX5P56178 289 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 CLDN15P56746 228 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 RPS3AP61247 264 aaKnown RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 MERTKQ12866 999 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 SELENBP1Q13228 472 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 RIPPLY2Q5TAB7 128 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 XKRXQ6PP77 449 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 PLEKHM3Q6ZWE6 761 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 ADGRE4PQ86SQ3 457 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 PATL1Q86TB9 770 aaKnown RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 MED12LQ86YW9 2145 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 ARMC8Q8IUR7 673 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 SLC15A3Q8IY34 581 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 LILRA2Q8N149 483 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 BHLHE22Q8NFJ8 381 aaPredicted RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 OR10Q1Q8NGQ4 319 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 SLC35B4Q969S0 331 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 RSPO3Q9BXY4 272 aaPredicted RBP16.74■□□□□ 0.27
DDR1-236ENST00000431373 TMEM185BQ9H7F4 350 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 ARL8BQ9NVJ2 186 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 CMTM6Q9NX76 183 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
DDR1-236ENST00000431373 SPTBN1Q01082 2364 aaKnown RBP16.73■□□□□ 0.27
DDR1-236ENST00000431373 CCT8L1PA6NM43 557 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 EIF1AYO14602 144 aaKnown RBP16.73■□□□□ 0.27
DDR1-236ENST00000431373 EFNA2O43921 213 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 GCM2O75603 506 aaPredicted RBP16.73■□□□□ 0.27
DDR1-236ENST00000431373 MFN2O95140 757 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 OPN1LWP04000 364 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 AGAP20933 346 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 CPA2P48052 419 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 C3orf33Q6P1S2 294 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 ESPNLQ6ZVH7 1005 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 SEM1Q6ZVN7 128 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 GRINAQ7Z429 371 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 FITM2Q8N6M3 262 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 OR2T12Q8NG77 320 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 BCAS4Q8TDM0 211 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 SDCCAG3Q96C92 435 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 KLHL15Q96M94 604 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 UCN2Q96RP3 112 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 PINK1Q9BXM7 581 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 CLCF1Q9UBD9 225 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 USP22Q9UPT9 525 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 RNF6Q9Y252 685 aa16.73■□□□□ 0.27
DDR1-236ENST00000431373 MBD3L4A6NDZ8 208 aaPredicted RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 MBD3L3A6NE82 208 aaPredicted RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 MBD3L5A6NJ08 208 aaPredicted RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 GJE1A6NN92 205 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 M0QX08 132 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 NME4O00746 187 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 TPST1O60507 370 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 PRG2P13727 222 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 SFTPDP35247 375 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 TIMP3P35625 211 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 APOBEC1P41238 236 aaKnown RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 ACAA2P42765 397 aaKnown RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 SLC7A2P52569 658 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 PSME3P61289 254 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 DMTNQ08495 405 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 VEZF1Q14119 521 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 KRT72Q14CN4 511 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 CTU2Q2VPK5 515 aaKnown RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 PDSS1Q5T2R2 415 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 POMZP3Q6PJE2 187 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 CCDC80Q76M96 950 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 ATP6V1C2Q8NEY4 427 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 MBD3L2Q8NHZ7 208 aaPredicted RBP16.72■□□□□ 0.27
DDR1-236ENST00000431373 ASB5Q8WWX0 329 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 WNT2BQ93097 391 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 ADGRG7Q96K78 797 aa16.72■□□□□ 0.27
DDR1-236ENST00000431373 CTPS2Q9NRF8 586 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms