RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SEPHS2Q99611 448 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 YY1AP1Q9H869 796 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 C12orf10Q9HB07 376 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 ACER3Q9NUN7 267 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 STOML1Q9UBI4 398 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 AURKCQ9UQB9 309 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 RPH3AQ9Y2J0 694 aaPredicted RBP9.98□□□□□ -0.81
CHD4-202ENST00000430771 FAM32AQ9Y421 112 aaKnown RBP9.98□□□□□ -0.81
CHD4-202ENST00000430771 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
CHD4-202ENST00000430771 TRGV5A0A0B4J1U4 118 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 A0A0B4J2E0 115 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 A0A1B0GWA3 101 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 A0A1B0GX12 115 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 TRAPPC13A5PLN9 417 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 CPSF4LA6NMK7 179 aaKnown RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 EIF4E1BA6NMX2 242 aaKnown RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 NPIPA5E9PKD4 350 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 CHP2O43745 196 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ADAM11O75078 769 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 OR5F1O95221 314 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 RAP2AP10114 183 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 PRG2P13727 222 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 TCEA1P23193 301 aaKnown RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 HTR2AP28223 471 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 MAGEA2P43356 314 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 POLR2HP52434 150 aaKnown RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 SESN3P58005 492 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ACTR3P61158 418 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 HOXC5Q00444 222 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 MERTKQ12866 999 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 OR1Q1Q15612 314 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 TOMM34Q15785 309 aaPredicted RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 NPTX1Q15818 432 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 KRTCAP3Q53RY4 240 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 CMPK2Q5EBM0 449 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ALG10BQ5I7T1 473 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 RNFT1Q5M7Z0 435 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 WIPI1Q5MNZ9 446 aaPredicted RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 ENTPD8Q5MY95 495 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ARHGAP11AQ6P4F7 1023 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ADGRG5Q8IZF4 528 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 OFCC1Q8IZS5 231 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 GHDCQ8N2G8 530 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 CISD2Q8N5K1 135 aaKnown RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 OR4D11Q8NGI4 311 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ADAMTS16Q8TE57 1224 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 PHF10Q8WUB8 498 aaKnown RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 SLC25A43Q8WUT9 341 aaPredicted RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 ZNF347Q96SE7 839 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 SLX1AQ9BQ83 275 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 RSPO3Q9BXY4 272 aaPredicted RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 TSPAN10Q9H1Z9 355 aaPredicted RBP9.97□□□□□ -0.81
CHD4-202ENST00000430771 SLC6A15Q9H2J7 730 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 SERINC1Q9NRX5 453 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 NPIPA1Q9UND3 350 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 LIPGQ9Y5X9 500 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ENPP4Q9Y6X5 453 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 ATMQ13315 3056 aa9.97□□□□□ -0.81
CHD4-202ENST00000430771 OR2M5A3KFT3 312 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ELOA3DA6NLF2 546 aaPredicted RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 GJE1A6NN92 205 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 hCG_2039718K7EN88 272 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 AQP7O14520 342 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ADAMDEC1O15204 470 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 SUSD5O60279 629 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 NTN1O95631 604 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ACTL6AO96019 429 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 CELA3AP09093 270 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 THRBP10828 461 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 PNMTP11086 282 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 RHCEP18577 417 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 POU3F2P20265 443 aaPredicted RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 CHMP24386 653 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 MST1P26927 711 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 TACR3P29371 465 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 MAP2K6P52564 334 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 VLDLRP98155 873 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ST3GAL3Q11203 375 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 KPNB1Q14974 876 aaKnown RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 TMEM44Q2T9K0 475 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ELOA3BQ3SY89 546 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 PRR30Q53SZ7 412 aaPredicted RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 NHSL2Q5HYW2 709 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 COLEC12Q5KU26 742 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ZFP1Q6P2D0 407 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ULK3Q6PHR2 472 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 TRILQ7L0X0 811 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 PIWIL3Q7Z3Z3 882 aaKnown RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 RBM45Q8IUH3 476 aaKnown RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 ZDHHC21Q8IVQ6 265 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 ELOA3Q8NG57 546 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 NEIL3Q8TAT5 605 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 RNF217Q8TC41 542 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 CPT1CQ8TCG5 803 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 C3orf49Q96BT1 292 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 SARAFQ96BY9 339 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 SNRNP40Q96DI7 357 aaKnown RBP9.96□□□□□ -0.82
CHD4-202ENST00000430771 SLC41A3Q96GZ6 507 aa9.96□□□□□ -0.82
CHD4-202ENST00000430771 MPP4Q96JB8 637 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms