RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 ERI1Q8IV48 349 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 APCDD1LQ8NCL9 501 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 NFAM1Q8NET5 270 aaPredicted RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 BRIX1Q8TDN6 353 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 RAB2BQ8WUD1 216 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 MR1Q95460 341 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 TP53INP1Q96A56 240 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 VMP1Q96GC9 406 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 COG8Q96MW5 612 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 DOK1Q99704 481 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 ZNF426Q9BUY5 554 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 TBL1XR1Q9BZK7 514 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 NAA50Q9GZZ1 169 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 OR52D1Q9H346 318 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 LIN28AQ9H9Z2 209 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 MEPEQ9NQ76 525 aaPredicted RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 IL20RAQ9UHF4 553 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 CFAP54Q96N23 3096 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 C9J4A7 227 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 GNB5O14775 395 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 CH25HO95992 272 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 HMGN1P05114 100 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 DBTP11182 482 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 FUT1P19526 365 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 ENDOUP21128 410 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 SLC15A1P46059 708 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 CRYZQ08257 329 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 UBE2UQ5VVX9 321 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 PLAG1Q6DJT9 500 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 WBP2NLQ6ICG8 309 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 LINC00114Q6XXX2 140 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 BCDIN3DQ7Z5W3 292 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 C9orf43Q8TAL5 461 aaPredicted RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 LRFN5Q96NI6 719 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 MESP1Q9BRJ9 268 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 FUNDC2Q9BWH2 189 aa13.11□□□□□ -0.31
CALD1-207ENST00000430085 PPIEQ9UNP9 301 aaKnown RBP13.11□□□□□ -0.31
CALD1-207ENST00000430085 TRBV11-1A0A0K0K1C0 115 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 C4orf47A7E2U8 309 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 B4E171 279 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 NDUFB5O43674 189 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 HCN1O60741 890 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 LCKP06239 509 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 NGFRP08138 427 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 PCSK6P29122 969 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 TSPAN7P41732 249 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 SLC6A8P48029 635 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 MLLT10P55197 1068 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 EFNB1P98172 346 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 ZNF91Q05481 1191 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 CBLN3Q6UW01 205 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 TMEM205Q6UW68 189 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 SLCO6A1Q86UG4 719 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 NAXDQ8IW45 347 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 OR13C2Q8NGS9 318 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 ZNF582Q96NG8 517 aaPredicted RBP13.1□□□□□ -0.31
CALD1-207ENST00000430085 STRADBQ9C0K7 418 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 LAT2Q9GZY6 243 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 AKIRIN1Q9H9L7 192 aaPredicted RBP13.1□□□□□ -0.31
CALD1-207ENST00000430085 MED17Q9NVC6 651 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.1□□□□□ -0.31
CALD1-207ENST00000430085 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
CALD1-207ENST00000430085 A0A087WUJ7 227 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 A0A1W2PQD3 144 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 OR6C70A6NIJ9 312 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 ELOA3DA6NLF2 546 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 ENO4A6NNW6 628 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 SURF4O15260 269 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 OIP5O43482 229 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 HCRTR2O43614 444 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 FOXD2O60548 495 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 RFPL3O75679 317 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 PNMTP11086 282 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 FAM199XQ6PEV8 388 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 SMARCD3Q6STE5 483 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 OAFQ86UD1 273 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 LSRQ86X29 649 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 OR5L2Q8NGL0 311 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 THAP3Q8WTV1 239 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 PMEPA1Q969W9 287 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 C3orf49Q96BT1 292 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 C8orf44Q96CB5 159 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 TMEM80Q96HE8 168 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 SH3YL1Q96HL8 342 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 CCNL2Q96S94 520 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 WDR77Q9BQA1 342 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 CDCA4Q9BXL8 241 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 UBQLN3Q9H347 655 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 ZBTB20Q9HC78 741 aaPredicted RBP13.09□□□□□ -0.31
CALD1-207ENST00000430085 HHATLQ9HCP6 504 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 FAM186AA6NE01 2351 aa13.09□□□□□ -0.31
CALD1-207ENST00000430085 GVINP1Q7Z2Y8 2422 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms