RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 TMEM201Q5SNT2 666 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 LRIF1Q5T3J3 769 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 TMEM64Q6YI46 380 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 FAM86B1Q8N7N1 296 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 OR4C15Q8NGM1 316 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 OR6N2Q8NGY6 317 aa12□□□□□ -0.49
PTCH1-207ENST00000429896 MYO18AQ92614 2054 aaKnown RBP12□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF264O43296 627 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF43P17038 809 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 CSRP2Q16527 193 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 EEF1A1P5Q5VTE0 462 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 VRK2Q86Y07 508 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF283Q8N7M2 679 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 B3GNT7Q8NFL0 401 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 TAMM41Q96BW9 452 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 OCIAD1Q9NX40 245 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 CARD8Q9Y2G2 431 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 S100A2P29034 98 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 IDUAP35475 653 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 KCNJ10P78508 379 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 GALK2Q01415 458 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 MRPL49Q13405 166 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 NSMAFQ92636 917 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF768Q9H5H4 540 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ZNF701Q9NV72 531 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 GPR83Q9NYM4 423 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ORC5O43913 435 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 TLE3Q04726 772 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 MFSD12Q6NUT3 480 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 TBC1D15Q8TC07 691 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 LMF2Q9BU23 707 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 CCDC86Q9H6F5 360 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 TMEM74BQ9NUR3 256 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 C14orf166Q9Y224 244 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 IGHV5-10-1A0A0J9YXX1 117 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 hCG_1807616A0A1W2PRN6 198 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 GNRHRP30968 328 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 PCBP4P57723 403 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 PPP1CAP62136 330 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 UTP4Q969X6 686 aaKnown RBP11.99□□□□□ -0.49
PTCH1-207ENST00000429896 POLE4Q9NR33 117 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 CTSFQ9UBX1 484 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 REV1Q9UBZ9 1251 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 PRAMEF25A6NGN4 478 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 FTH1P19P0C7X4 201 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 C17orf67Q0P5P2 114 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 NADK2Q4G0N4 442 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 SLC22A16Q86VW1 577 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 TOMM5Q8N4H5 51 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 OR2T33Q8NG76 320 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 CD300LFQ8TDQ1 290 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 SAP25Q8TEE9 199 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ANKRA2Q9H9E1 313 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 ENPP4Q9Y6X5 453 aa11.99□□□□□ -0.49
PTCH1-207ENST00000429896 SERINC4A6NH21 518 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 ACOX3O15254 700 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 B4GAT1O43505 415 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 EML2O95834 649 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 SOD1P00441 154 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 PRAMEF8Q5VWM4 474 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 PRAMEF7Q5VXH5 474 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 LCN8Q6JVE9 175 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 KANSL1Q7Z3B3 1105 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 DUSP19Q8WTR2 217 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 YTHDF1Q9BYJ9 559 aaKnown RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 EP400Q96L91 3159 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 DCDC2BA2VCK2 349 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 OR2T1O43869 369 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 CD82P27701 267 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 CDH11P55287 796 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 FAM199XQ6PEV8 388 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 KCTD7Q96MP8 289 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 STACQ99469 402 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 CCM2LQ9NUG4 571 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 TUBA8Q9NY65 449 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 KCNE1BA0A087WTH5 132 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 CTSVO60911 334 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 TRHRP34981 398 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 GPR4P46093 362 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 PIGFQ07326 219 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 GRK1Q15835 563 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 STON2Q8WXE9 905 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 NINJ1Q92982 152 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 SLC6A7Q99884 636 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 KAT8Q9H7Z6 458 aaKnown RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 A6NLC8 198 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 JRKO75564 520 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 SFTPBP07988 381 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 NAA10P41227 235 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 OR7A5Q15622 319 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 ERI1Q8IV48 349 aaKnown RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 NRMQ8IXM6 262 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 OR5J2Q8NH18 312 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 NEURL3Q96EH8 262 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 C19orf53Q9UNZ5 99 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-207ENST00000429896 ALG5Q9Y673 324 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 FRS3O43559 492 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 CBFA2T3O75081 653 aa11.98□□□□□ -0.49
PTCH1-207ENST00000429896 GP1BAP07359 652 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms