RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ARRB2P32121 409 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 IDUAP35475 653 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 RNF144AP50876 292 aaPredicted RBP13.2□□□□□ -0.3
MSH5-208ENST00000429846 CLDN8P56748 225 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 CSNK2A1P68400 391 aaPredicted RBP13.2□□□□□ -0.3
MSH5-208ENST00000429846 BSPH1Q075Z2 132 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 SKP2Q13309 424 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 TIGD2Q4W5G0 525 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 P2RY8Q86VZ1 359 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 ZNF619Q8N2I2 560 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 OR2W6PQ8NHA6 318 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 RFWD2Q8NHY2 731 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 OR5B2Q96R09 309 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 TRIM2Q9C040 744 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 GRIP2Q9C0E4 1043 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 ZNF350Q9GZX5 532 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 EXD2Q9NVH0 621 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 FAIMQ9NVQ4 179 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
MSH5-208ENST00000429846 IGHV3-15A0A0B4J1V0 119 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 RNF103-CHMP3A0A140T963 221 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 KIAA1324LA8MWY0 1029 aaPredicted RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 RNASET2O00584 256 aaKnown RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 CSTAP01040 98 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 GUSBP08236 651 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 COX5AP20674 150 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 MATN1P21941 496 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 EMX2Q04743 252 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 DMTNQ08495 405 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 IFFO1Q0D2I5 559 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 PPA1Q15181 289 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 GPR68Q15743 365 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 ARHGAP11BQ3KRB8 267 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 SYT14P1Q58G82 188 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 TIMM23BQ5SRD1 257 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 ABLIM2Q6H8Q1 611 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 EIF3MQ7L2H7 374 aaKnown RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 C16orf62Q7Z3J2 963 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 C6orf120Q7Z4R8 191 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 KBTBD8Q8NFY9 601 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 MIPOL1Q8TD10 442 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 MUCL1Q96DR8 90 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 SLC35G5Q96KT7 338 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 THUMPD3Q9BV44 507 aaKnown RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 ROPN1BQ9BZX4 212 aaPredicted RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 SERHL2Q9H4I8 314 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 ALG2Q9H553 416 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 ROPN1Q9HAT0 212 aaPredicted RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 BARX1Q9HBU1 254 aaPredicted RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 POLE3Q9NRF9 147 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 EMC3Q9P0I2 261 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 PCDHGB4Q9UN71 923 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 LIPT1Q9Y234 373 aa13.19□□□□□ -0.3
MSH5-208ENST00000429846 MAGED1Q9Y5V3 778 aaPredicted RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 SPIN1Q9Y657 262 aaPredicted RBP13.19□□□□□ -0.3
MSH5-208ENST00000429846 CR1P17927 2039 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 SONP18583 2426 aaKnown RBP13.18□□□□□ -0.3
MSH5-208ENST00000429846 KIAA0513O60268 411 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 SPAG7O75391 227 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 CRLF1O75462 422 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 UGT2B17O75795 530 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 CYP7B1O75881 506 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 LYZL6O75951 148 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 H6PDO95479 791 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 BPGMP07738 259 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 THBS1P07996 1170 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 UBTFL6P0CB48 400 aaPredicted RBP13.18□□□□□ -0.3
MSH5-208ENST00000429846 FKBP2P26885 142 aaKnown RBP13.18□□□□□ -0.3
MSH5-208ENST00000429846 DIO1P49895 249 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 SESN3P58005 492 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 KRTAP1-1Q07627 177 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 MERTKQ12866 999 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 PDK3Q15120 406 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 STK11Q15831 433 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 PGGHGQ32M88 737 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 PGS1Q32NB8 556 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 HEPHL1Q6MZM0 1159 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 TMPPEQ6ZT21 453 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 DTX2Q86UW9 622 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 OR8J2Q8NGG1 315 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 ZNF524Q96C55 264 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 ZHX1-C8orf76Q96EF9 292 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 RADILQ96JH8 1075 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 ZNF300Q96RE9 604 aaPredicted RBP13.18□□□□□ -0.3
MSH5-208ENST00000429846 SLCO5A1Q9H2Y9 848 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 ACER3Q9NUN7 267 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 PRSS50Q9UI38 385 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 KCNE5Q9UJ90 142 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 SLC35A3Q9Y2D2 325 aa13.18□□□□□ -0.3
MSH5-208ENST00000429846 IGKV3D-15A0A087WSY6 115 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 GOLGA8QA0A0J9YX86 632 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 GOLGA8OA6NCC3 632 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 DPRXA6NFQ7 191 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 GOLGA8NF8WBI6 632 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 SULT2B1O00204 365 aa13.17□□□□□ -0.3
MSH5-208ENST00000429846 ANKRD28O15084 1053 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms