RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	FAM71C	Q8NEG0	241 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	ABHD3	Q8WU67	409 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	OIT3	Q8WWZ8	545 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	ZBTB9	Q96C00	473 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	PIK3IP1	Q96FE7	263 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	HS3ST6	Q96QI5	342 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	REPIN1	Q9BWE0	567 aa	Known RBP	15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	KLHL4	Q9C0H6	718 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	SAP130	Q9H0E3	1048 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	OR10A4	Q9H209	315 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	GP6	Q9HCN6	339 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	TIGAR	Q9NQ88	270 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	POLE3	Q9NRF9	147 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	MKLN1	Q9UL63	735 aa		15.8	■□□□□ 0.12
MRPL28-203	ENST00000429738	SON	P18583	2426 aa	Known RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	TRIM64	A6NGJ6	449 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	TRIM64B	A6NI03	449 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	CPSF4	O95639	269 aa	Known RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	OR12D1	P0DN82	309 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	SLC18A1	P54219	525 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	CASP9	P55211	416 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	RNPS1	Q15287	305 aa	Known RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	MAPK14	Q16539	360 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	FAM174B	Q3ZCQ3	159 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	ANKRD34A	Q69YU3	496 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	C16orf62	Q7Z3J2	963 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	RFWD2	Q8NHY2	731 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	ST8SIA1	Q92185	356 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	ZC3HAV1L	Q96H79	300 aa	Known RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	CCDC115	Q96NT0	180 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	CCL19	Q99731	98 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	PAIP2	Q9BPZ3	127 aa	Known RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	THUMPD3	Q9BV44	507 aa	Known RBP	15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	AIG1	Q9NVV5	245 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	THAP1	Q9NVV9	213 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	KLHL13	Q9P2N7	655 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	BTNL2	Q9UIR0	455 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	USF3	Q68DE3	2245 aa		15.79	■□□□□ 0.12
MRPL28-203	ENST00000429738	UQCRHL	A0A096LP55	91 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	TMEM120B	A0PK00	339 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	PRAMEF27	A3QJZ7	478 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	KLF4	O43474	513 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	PSMB1	P20618	241 aa	Known RBP	15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	IL12A	P29459	219 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	PGM1	P36871	562 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	CCR4	P51679	360 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	RAC3	P60763	192 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	UFM1	P61960	85 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	HHAT	Q5VTY9	493 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	C3orf33	Q6P1S2	294 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	TFAP2E	Q6VUC0	442 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	FRRS1	Q6ZNA5	592 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	FCRLA	Q7L513	359 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	STK32C	Q86UX6	486 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	TUSC5	Q8IXB3	177 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	TMCO5A	Q8N6Q1	288 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	ANKRD42	Q8N9B4	389 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	XAGE5	Q8WWM1	108 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	RAB8B	Q92930	207 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	ROPN1L	Q96C74	230 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	PERP	Q96FX8	193 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	REXO5	Q96IC2	774 aa	Known RBP	15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	C12orf49	Q9H741	205 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	UBTD1	Q9HAC8	227 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	FANCF	Q9NPI8	374 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	ING1	Q9UK53	422 aa	Predicted RBP	15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	ADAM21	Q9UKJ8	722 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	GPR52	Q9Y2T5	361 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	WDR45	Q9Y484	360 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	GPR45	Q9Y5Y3	372 aa		15.78	■□□□□ 0.12
MRPL28-203	ENST00000429738	HDAC3	O15379	428 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	BCAS1	O75363	584 aa	Predicted RBP	15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	GCM2	O75603	506 aa	Predicted RBP	15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	CSTA	P01040	98 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	C1QC	P02747	245 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	UBTFL6	P0CB48	400 aa	Predicted RBP	15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	ENPP1	P22413	925 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	S100A3	P33764	101 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	SESN3	P58005	492 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	PLAUR	Q03405	335 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	TIGD2	Q4W5G0	525 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	BEX5	Q5H9J7	111 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	TMEM201	Q5SNT2	666 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	ATAD3B	Q5T9A4	648 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	C20orf204	Q6ZNR8	217 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	EIF3M	Q7L2H7	374 aa	Known RBP	15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	NUFIP2	Q7Z417	695 aa	Known RBP	15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	SPATA19	Q7Z5L4	167 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	GABRG1	Q8N1C3	465 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	SLC43A2	Q8N370	569 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	ATP6V1C2	Q8NEY4	427 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	ZG16B	Q96DA0	208 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	PSD2	Q9BQI7	771 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	SLC35A5	Q9BS91	424 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	BCO1	Q9HAY6	547 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	MARCO	Q9UEW3	520 aa	Predicted RBP	15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	SLC35A3	Q9Y2D2	325 aa		15.77	■□□□□ 0.12
MRPL28-203	ENST00000429738	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	15.76	■□□□□ 0.11
MRPL28-203	ENST00000429738		A0A1W2PNR3	127 aa		15.76	■□□□□ 0.11

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms