RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 TMED9Q9BVK6 235 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM106CQ9BVX2 250 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CXCL16Q9H2A7 254 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 PLEKHA1Q9HB21 404 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 KRCC1Q9NPI7 259 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 THSD1Q9NS62 852 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SH3BGRL2Q9UJC5 107 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CAMK2AQ9UQM7 478 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 EXOSC1Q9Y3B2 195 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HEPACAM2A8MVW5 462 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SCAMP2O15127 329 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CHST10O43529 356 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 RGS14O43566 566 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 EFCAB14O75071 495 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 JCHAINP01591 159 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HSD3B1P14060 373 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HTR6P50406 440 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 LUMP51884 338 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 WDR5P61964 334 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SELENOWP63302 87 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TIAL1Q01085 375 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ARHGAP19Q14CB8 494 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HMGN3Q15651 99 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 MESTQ5EB52 335 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HIST2H3PS2Q5TEC6 136 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 NKAIN2Q5VXU1 208 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SFRP4Q6FHJ7 346 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR10K2Q6IF99 312 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CEACAM20Q6UY09 585 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 LINGO4Q6UY18 593 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 GAREM2Q75VX8 874 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 CAMKMTQ7Z624 323 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF546Q86UE3 836 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 PNLDC1Q8NA58 520 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF485Q8NCK3 441 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR4F15Q8NGB8 312 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR4A4PQ8NGN8 299 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR51Q1Q8NH59 317 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SLC35F5Q8WV83 523 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 GTPBP3Q969Y2 492 aaKnown RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 S100A13Q99584 98 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 LAT2Q9GZY6 243 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 KATNBL1Q9H079 304 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 MFSD1Q9H3U5 465 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 GSX1Q9H4S2 264 aaPredicted RBP8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF408Q9H9D4 720 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 HRASLSQ9HDD0 168 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 PARD6AQ9NPB6 346 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZMYM5Q9UJ78 669 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZDHHC8Q9ULC8 765 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 SLC22A14Q9Y267 594 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 TIMM10BQ9Y5J6 103 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 BPTFQ12830 3046 aa8.26□□□□□ -1.09
CDC42BPA-206ENST00000429440 A6NLC8 198 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM229AB2RXF0 380 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 EREGO14944 169 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 HYAL3O43820 417 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 REM1O75628 298 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 AGR2O95994 175 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 PMP2P02689 132 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 LGALS2P05162 132 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 NPSP0C0P6 89 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 HKR1P10072 659 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 OSMP13725 252 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ADH7P40394 386 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 CDKN1BP46527 198 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 GEMP55040 296 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 RAB40BQ12829 278 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 TMEM115Q12893 351 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 FNDC3BQ53EP0 1204 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR2G6Q5TZ20 316 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 DPPA4Q7L190 304 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 EID2Q8N6I1 236 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 KRTCAP2Q8N6L1 136 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 HJURPQ8NCD3 748 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR10A7Q8NGE5 316 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 THAP4Q8WY91 577 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 OR1F2PQ96R84 312 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ACBD6Q9BR61 282 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 FKRPQ9H9S5 495 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 RPF1Q9H9Y2 349 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 NPFFR2Q9Y5X5 522 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 CEP350Q5VT06 3117 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ELOA3CA0A087WX78 387 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 C2orf78A6NCI8 922 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ZNF705EA8MWA4 302 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 FOXE1O00358 373 aaPredicted RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 GABRDO14764 452 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 RPP40O75818 363 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 ADAP00813 363 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 OPN1LWP04000 364 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 SNRPCP09234 159 aaKnown RBP8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 TYRP1P17643 537 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 MPZP25189 248 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 AGTR2P50052 363 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 CRYBA2P53672 197 aa8.25□□□□□ -1.09
CDC42BPA-206ENST00000429440 GAS1P54826 345 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms