RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.17■□□□□ 0.02
TRIM39-209ENST00000428728 SLC43A2Q8N370 569 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 IGFBPL1Q8WX77 278 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 RAB8BQ92930 207 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 KISS1RQ969F8 398 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-209ENST00000428728 ZIM3Q96PE6 472 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 ZNF300Q96RE9 604 aaPredicted RBP15.17■□□□□ 0.02
TRIM39-209ENST00000428728 PSD2Q9BQI7 771 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 TMEM204Q9BSN7 226 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 TMEM109Q9BVC6 243 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 C20orf27Q9GZN8 174 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 LAT2Q9GZY6 243 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 GP6Q9HCN6 339 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 EXD2Q9NVH0 621 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 PRSS50Q9UI38 385 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 RAP2CQ9Y3L5 183 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 RNF115Q9Y4L5 304 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 CR1P17927 2039 aa15.17■□□□□ 0.02
TRIM39-209ENST00000428728 CADP27708 2225 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 C9JVG2 144 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 SMAD9O15198 467 aaKnown RBP15.16■□□□□ 0.02
TRIM39-209ENST00000428728 KIAA0513O60268 411 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 CNOT4O95628 575 aaKnown RBP15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ATP5J2P56134 94 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 SESN3P58005 492 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 RASGEF1BQ0VAM2 473 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 TAB1Q15750 504 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ATAD3BQ5T9A4 648 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 WDR93Q6P2C0 686 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 BHLHA15Q7RTS1 189 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-209ENST00000428728 HMGN2P46Q86SG4 172 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ATG4DQ86TL0 474 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ZNF611Q8N823 705 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 OR8J2Q8NGG1 315 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 XAGE5Q8WWM1 108 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ST8SIA1Q92185 356 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ARL8AQ96BM9 186 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ZNF775Q96BV0 537 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-209ENST00000428728 DNAJA3Q96EY1 480 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 HDHD5Q9BXW7 423 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 NUF2Q9BZD4 464 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 BCO1Q9HAY6 547 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ING1Q9UK53 422 aaPredicted RBP15.16■□□□□ 0.02
TRIM39-209ENST00000428728 LAMP3Q9UQV4 416 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 WDR45Q9Y484 360 aa15.16■□□□□ 0.02
TRIM39-209ENST00000428728 ETV2O00321 342 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-209ENST00000428728 BIRC5O15392 142 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 BCAS1O75363 584 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-209ENST00000428728 LYZL6O75951 148 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 FESP07332 822 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 PGCP20142 388 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 BGNP21810 368 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 UQCRC2P22695 453 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 EDNRAP25101 427 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 PCSK6P29122 969 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 CHI3L1P36222 383 aaPredicted RBP15.15■□□□□ 0.02
TRIM39-209ENST00000428728 OR3A2P47893 321 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 SLC1A6P48664 564 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 PHC1P78364 1004 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 FUT5Q11128 374 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 STK11Q15831 433 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 MAPK14Q16539 360 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 SPANXN4Q5MJ08 99 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 HEPHL1Q6MZM0 1159 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 EIF3MQ7L2H7 374 aaKnown RBP15.15■□□□□ 0.02
TRIM39-209ENST00000428728 MREGQ8N565 214 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 MIPOL1Q8TD10 442 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 TMEM234Q8WY98 164 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 NEUROG1Q92886 237 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 SORT1Q99523 831 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 POTEKPQ9BYX7 375 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 NGBQ9NPG2 151 aa15.15■□□□□ 0.02
TRIM39-209ENST00000428728 ZNF814B7Z6K7 855 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 TM9SF1O15321 606 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 CYTIPO60759 359 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 SCN2BO60939 215 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 CD3EP07766 207 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 TFPIP10646 304 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 RYKP34925 604 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 DIO1P49895 249 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 KHKP50053 298 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 RPL14P50914 215 aaKnown RBP15.14■□□□□ 0.01
TRIM39-209ENST00000428728 NME5P56597 212 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 RPS4XP62701 263 aaKnown RBP15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ITGADQ13349 1161 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 P2RY6Q15077 328 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 GPAT3Q53EU6 434 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 SYT14P1Q58G82 188 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 NCMAPQ5T1S8 102 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ANXA8L1Q5VT79 327 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 SAXO2Q658L1 398 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 TYW3Q6IPR3 259 aaKnown RBP15.14■□□□□ 0.01
TRIM39-209ENST00000428728 Q6ZT83 130 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 LSRQ86X29 649 aaPredicted RBP15.14■□□□□ 0.01
TRIM39-209ENST00000428728 KBTBD8Q8NFY9 601 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ZNF563Q8TA94 476 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 FBXW5Q969U6 566 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 TESCQ96BS2 214 aa15.14■□□□□ 0.01
TRIM39-209ENST00000428728 ROPN1LQ96C74 230 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms