RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CPSF4O95639 269 aaKnown RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CGAP01215 116 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 TROVE2P10155 538 aaKnown RBP eCLIP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 EPXP11678 715 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 BMP5P22003 454 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CDKN2CP42773 168 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 KIR2DL2P43627 348 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 STARP49675 285 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 SUCLG1P53597 346 aaKnown RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 DSTNP60981 165 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CSNK2A1P68400 391 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 STX5Q13190 355 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 LARS2Q15031 903 aaKnown RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 QPRTQ15274 297 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 GPR68Q15743 365 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 TIGD2Q4W5G0 525 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 LIN52Q52LA3 116 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF787Q6DD87 383 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 TNFAIP8L2Q6P589 184 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF550Q7Z398 422 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 LILRA2Q8N149 483 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 OR10D3Q8NH80 312 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 BBS10Q8TAM1 723 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 FBXO30Q8TB52 745 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 NUDT8Q8WV74 236 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 SMPDL3BQ92485 455 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 NINJ1Q92982 152 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 RNF145Q96MT1 663 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 SH3GL1Q99961 368 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 EBF4Q9BQW3 602 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 SLC39A3Q9BRY0 314 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 SPATA5L1Q9BVQ7 753 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CCDC106Q9BWC9 280 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 BCO1Q9HAY6 547 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 MKLN1Q9UL63 735 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF232Q9UNY5 417 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 CARD8Q9Y2G2 431 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 RPH3AQ9Y2J0 694 aaPredicted RBP8.2□□□□□ -1.1
SMC1A-203ENST00000428014 AP3M1Q9Y2T2 418 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 EMC9Q9Y3B6 208 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 PCDHB14Q9Y5E9 798 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 LRBAP50851 2863 aa8.2□□□□□ -1.1
SMC1A-203ENST00000428014 DCHS2Q6V1P9 2916 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 KIAA1549Q9HCM3 1950 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 MPDZO75970 2070 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 IGKV3D-15A0A087WSY6 115 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PRAMEF27A3QJZ7 478 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PRORSD1PA6NEY8 169 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF724A8MTY0 619 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 EVPLLA8MZ36 301 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 H3BML4 177 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 ZNHIT1O43257 154 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 EIF1BO60739 113 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 TMCC2O75069 709 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 SYNGR4O95473 234 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PMS2P2O95744 297 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 TGM6O95932 706 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CHRM4P08173 479 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 ARAFP10398 606 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 NR2F1P10589 423 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 IL7RP16871 459 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PAX7P23759 505 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 COL8A1P27658 744 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PRKAR1BP31321 381 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 SLC1A3P43003 542 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 AGFG1P52594 562 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 SLC16A1P53985 500 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CLDN20P56880 219 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CARD18P57730 90 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 SESN3P58005 492 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 RPS26P62854 115 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CHRNEQ04844 493 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PON3Q15166 354 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 MAPRE2Q15555 327 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 MAPK11Q15759 364 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 MAPK14Q16539 360 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 SGCBQ16585 318 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 ZNF239Q16600 458 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 GPAT3Q53EU6 434 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 C6orf10Q5SRN2 563 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 C6orf89Q6UWU4 347 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 BEND4Q6ZU67 534 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 NCCRP1Q6ZVX7 275 aaPredicted RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 P4HA3Q7Z4N8 544 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 LSMEM1Q8N8F7 131 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 OR9I1Q8NGQ6 314 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 FBXO27Q8NI29 283 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 FNDC9Q8TBE3 224 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 SLC38A5Q8WUX1 472 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 WDR60Q8WVS4 1066 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 STARD4Q96DR4 205 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 REXO5Q96IC2 774 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 INPP5KQ9BT40 448 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 PINK1Q9BXM7 581 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 HDHD5Q9BXW7 423 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 POTEKPQ9BYX7 375 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 ADAM19Q9H013 955 aa8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CACYBPQ9HB71 228 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 DNAJB12Q9NXW2 375 aaKnown RBP8.19□□□□□ -1.1
SMC1A-203ENST00000428014 CCDC167Q9P0B6 97 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms