RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ESPNLQ6ZVH7 1005 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 C10orf111Q8N326 155 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 ARFGAP2Q8N6H7 521 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 ZNF563Q8TA94 476 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 SLC38A5Q8WUX1 472 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 MAL2Q969L2 176 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 C14orf79Q96F83 325 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 LRRC46Q96FV0 321 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 TMEM19Q96HH6 336 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 MRGPRX4Q96LA9 322 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 TMEM120AQ9BXJ8 343 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 ZNF385DQ9H6B1 395 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 COQ10BQ9H8M1 238 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 ACER3Q9NUN7 267 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 FGFR1OP2Q9NVK5 253 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 VAPAQ9P0L0 249 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 PACSIN3Q9UKS6 424 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 SLC35A3Q9Y2D2 325 aa13.32□□□□□ -0.28
RTN4-210ENST00000427710 HRNRQ86YZ3 2850 aaPredicted RBP13.32□□□□□ -0.28
RTN4-210ENST00000427710 AGAP5A6NIR3 686 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 DNAJA2O60884 412 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 IL7RP16871 459 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 CCNA2P20248 432 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 RPS4Y1P22090 263 aaKnown RBP13.31□□□□□ -0.28
RTN4-210ENST00000427710 ELK4P28324 431 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 ADH6P28332 368 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 SELENBP1Q13228 472 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 RGNQ15493 299 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 PDSS1Q5T2R2 415 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 MRPL2Q5T653 305 aaKnown RBP13.31□□□□□ -0.28
RTN4-210ENST00000427710 ZNF474Q6S9Z5 364 aaPredicted RBP13.31□□□□□ -0.28
RTN4-210ENST00000427710 ZNF836Q6ZNA1 936 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 PLEKHM3Q6ZWE6 761 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 ZNF610Q8N9Z0 462 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 PIGMQ9H3S5 423 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 IKZF5Q9H5V7 419 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 MTHFD2LQ9H903 347 aaPredicted RBP13.31□□□□□ -0.28
RTN4-210ENST00000427710 MCCC2Q9HCC0 563 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 CTPS2Q9NRF8 586 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 RLIMQ9NVW2 624 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 DNAJB12Q9NXW2 375 aaKnown RBP13.31□□□□□ -0.28
RTN4-210ENST00000427710 KCNN3Q9UGI6 736 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 MCTS1Q9ULC4 181 aaKnown RBP13.31□□□□□ -0.28
RTN4-210ENST00000427710 ROS1P08922 2347 aa13.31□□□□□ -0.28
RTN4-210ENST00000427710 A8MXE2 369 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 DBIP07108 87 aaKnown RBP13.3□□□□□ -0.28
RTN4-210ENST00000427710 VIMP08670 466 aaKnown RBP13.3□□□□□ -0.28
RTN4-210ENST00000427710 GKN3PP0CG01 181 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 IDH2P48735 452 aaKnown RBP13.3□□□□□ -0.28
RTN4-210ENST00000427710 TXNL4AP83876 142 aaKnown RBP13.3□□□□□ -0.28
RTN4-210ENST00000427710 FAM27E3Q08E93 113 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 GUSBP1Q15486 140 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 ZNF239Q16600 458 aaKnown RBP13.3□□□□□ -0.28
RTN4-210ENST00000427710 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 AP1ARQ63HQ0 302 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 TMEM200AQ86VY9 491 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 PEX5LQ8IYB4 626 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 OR52P1PQ8NH57 321 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 ABHD3Q8WU67 409 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 ST8SIA1Q92185 356 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 NRGNQ92686 78 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 OR5B2Q96R09 309 aa13.3□□□□□ -0.28
RTN4-210ENST00000427710 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
RTN4-210ENST00000427710 A0A1W2PP18 115 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 TUBAL3A6NHL2 446 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 ETV2O00321 342 aaPredicted RBP13.29□□□□□ -0.28
RTN4-210ENST00000427710 PLGP00747 810 aaPredicted RBP13.29□□□□□ -0.28
RTN4-210ENST00000427710 CGAP01215 116 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 CRHP06850 196 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 TFPIP10646 304 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 FCGR2AP12318 317 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 ENPP1P22413 925 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 SLC7A1P30825 629 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 CRISP3P54108 245 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 CTBP2P56545 445 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 EXOC3L2Q2M3D2 409 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 HSP90B2PQ58FF3 399 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 RETREG3Q86VR2 466 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 CLIP4Q8N3C7 705 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 NFKBIDQ8NI38 313 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 STON2Q8WXE9 905 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 TMEM234Q8WY98 164 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 GPATCH1Q9BRR8 931 aaKnown RBP13.29□□□□□ -0.28
RTN4-210ENST00000427710 C12orf49Q9H741 205 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 EXOSC3Q9NQT5 275 aaKnown RBP13.29□□□□□ -0.28
RTN4-210ENST00000427710 FOXD3Q9UJU5 478 aaPredicted RBP13.29□□□□□ -0.28
RTN4-210ENST00000427710 PROCRQ9UNN8 238 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 ZNF443Q9Y2A4 671 aaPredicted RBP13.29□□□□□ -0.28
RTN4-210ENST00000427710 CHST2Q9Y4C5 530 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 DSPPQ9NZW4 1301 aa13.29□□□□□ -0.28
RTN4-210ENST00000427710 TRBV5-3A0A0A0MS03 114 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 MSTNO14793 375 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 FRS3O43559 492 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 NID1P14543 1247 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 MAGEA8P43361 318 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 ARFIP2P53365 341 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 EPS8Q12929 822 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 SELPLGQ14242 412 aa13.28□□□□□ -0.28
RTN4-210ENST00000427710 LIN52Q52LA3 116 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms