RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 HRASLS5Q96KN8 279 aa13.79□□□□□ -0.2
GINS3-203ENST00000426538 SECISBP2Q96T21 854 aaKnown RBP13.79□□□□□ -0.2
GINS3-203ENST00000426538 CNIH4Q9P003 139 aa13.79□□□□□ -0.2
GINS3-203ENST00000426538 PPP4R1LQ9P1A2 415 aa13.79□□□□□ -0.2
GINS3-203ENST00000426538 TMEM5Q9Y2B1 443 aa13.79□□□□□ -0.2
GINS3-203ENST00000426538 PCDHGB5Q9Y5G0 923 aa13.79□□□□□ -0.2
GINS3-203ENST00000426538 TRABD2BA6NFA1 517 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ELOA3DA6NLF2 546 aaPredicted RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 KPNA4O00629 521 aaPredicted RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 LYNP07948 512 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 IFI30P13284 250 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 CHMP24386 653 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ITGA3P26006 1051 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 MSX1P28360 303 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ST13P50502 369 aaKnown RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 IL5RAQ01344 420 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 PRKCDQ05655 676 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 SNTA1Q13424 505 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 RAPSNQ13702 412 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 PTGES3Q15185 160 aaKnown RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 COL28A1Q2UY09 1125 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ELOA3BQ3SY89 546 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ACER2Q5QJU3 275 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 SLC22A10Q63ZE4 541 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 BICRALQ6AI39 1079 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ELOA3Q8NG57 546 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 RNF138Q8WVD3 245 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 NXPE2Q96DL1 559 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 SGCZQ96LD1 299 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GPA33Q99795 319 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 REV1Q9UBZ9 1251 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 CHCHD2Q9Y6H1 151 aaPredicted RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 HSPE1-MOB4S4R3N1 261 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 EXPH5Q8NEV8 1989 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 C17orf51A8MQB3 221 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GNB5O14775 395 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 PIP5K1CO60331 668 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 TNFAIP8O95379 198 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 SOX14O95416 240 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GP1BBP13224 206 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 FPR3P25089 353 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GPR4P46093 362 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GSSP48637 474 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GAS1P54826 345 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 B3GNTL1Q67FW5 361 aaPredicted RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 VASH2Q86V25 355 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 MEX3DQ86XN8 651 aaKnown RBP13.78□□□□□ -0.2
GINS3-203ENST00000426538 PFN4Q8NHR9 129 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 GPR119Q8TDV5 335 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 TMEM234Q8WY98 164 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 BPIFA2Q96DR5 249 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 ZNF426Q9BUY5 554 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 STMN3Q9NZ72 180 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 WIF1Q9Y5W5 379 aa13.78□□□□□ -0.2
GINS3-203ENST00000426538 CDC40O60508 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
GINS3-203ENST00000426538 SLC34A2O95436 690 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 CXCR1P25024 350 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 SUMO3P55854 103 aaPredicted RBP13.77□□□□□ -0.21
GINS3-203ENST00000426538 ABHD17BQ5VST6 288 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 TMEM81Q6P7N7 255 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 Q6ZPB1 254 aaPredicted RBP13.77□□□□□ -0.21
GINS3-203ENST00000426538 RASSF6Q6ZTQ3 369 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 ATG4DQ86TL0 474 aaPredicted RBP13.77□□□□□ -0.21
GINS3-203ENST00000426538 ZNF786Q8N393 782 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 THAP4Q8WY91 577 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 PSMF1Q92530 271 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 PITX2Q99697 317 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 LHPPQ9H008 270 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 ADAM19Q9H013 955 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 C12orf10Q9HB07 376 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 CPNE5Q9HCH3 593 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 MEPEQ9NQ76 525 aaPredicted RBP13.77□□□□□ -0.21
GINS3-203ENST00000426538 TAS2R10Q9NYW0 307 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 MED11Q9P086 117 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 ABI3Q9P2A4 366 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 MYRFQ9Y2G1 1151 aa13.77□□□□□ -0.21
GINS3-203ENST00000426538 ANKUB1A6NFN9 424 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 ADAM10O14672 748 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 SAGP10523 405 aaPredicted RBP13.76□□□□□ -0.21
GINS3-203ENST00000426538 TACR3P29371 465 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 GGT2P36268 569 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 PTGDSP41222 190 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 RRADP55042 308 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 CTBP2P56545 445 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 NUP107P57740 925 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 CDC42P60953 191 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 ISL1P61371 349 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 MYBPC1Q00872 1141 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 CRYZQ08257 329 aaKnown RBP13.76□□□□□ -0.21
GINS3-203ENST00000426538 FOXC1Q12948 553 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 QPRTQ15274 297 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 TOMM34Q15785 309 aaPredicted RBP13.76□□□□□ -0.21
GINS3-203ENST00000426538 PRAMEF20Q5VT98 475 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 ISLR2Q6UXK2 745 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 TMPRSS11FQ6ZWK6 438 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 CYP4Z2PQ8N1L4 340 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 DEPDC4Q8N2C3 294 aa13.76□□□□□ -0.21
GINS3-203ENST00000426538 PAQR8Q8TEZ7 354 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms