RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 VRK2Q86Y07 508 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 SLC38A5Q8WUX1 472 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 WDR60Q8WVS4 1066 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 ROBO4Q8WZ75 1007 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 STARD4Q96DR4 205 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 RBM24Q9BX46 236 aaKnown RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 TMEM120AQ9BXJ8 343 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 OPN3Q9H1Y3 402 aaPredicted RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 IKZF5Q9H5V7 419 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 DNAJB12Q9NXW2 375 aaKnown RBP12.21□□□□□ -0.45
SNX3-204ENST00000426155 GALNT8Q9NY28 637 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 CRIM1Q9NZV1 1036 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 VAPAQ9P0L0 249 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 PACSIN3Q9UKS6 424 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 SLC35A3Q9Y2D2 325 aa12.21□□□□□ -0.45
SNX3-204ENST00000426155 ANKRD17O75179 2603 aaKnown RBP12.21□□□□□ -0.46
SNX3-204ENST00000426155 TRBV5-3A0A0A0MS03 114 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 IGHV3-15A0A0B4J1V0 119 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 A0A1W2PNR3 127 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 CLIC1O00299 241 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
SNX3-204ENST00000426155 ADAMDEC1O15204 470 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 DNAJA2O60884 412 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 TFPTP0C1Z6 253 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 KLK2P20151 261 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 SESN3P58005 492 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 MERTKQ12866 999 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 SELENBP1Q13228 472 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 GUSBP1Q15486 140 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 RGNQ15493 299 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 TMEM176BQ3YBM2 270 aaPredicted RBP12.2□□□□□ -0.46
SNX3-204ENST00000426155 SLC25A53Q5H9E4 307 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 LRIF1Q5T3J3 769 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 MRPL2Q5T653 305 aaKnown RBP12.2□□□□□ -0.46
SNX3-204ENST00000426155 OR2A2Q6IF42 318 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 ZNF836Q6ZNA1 936 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 BTLAQ7Z6A9 289 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 STON2Q8WXE9 905 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 OSTF1Q92882 214 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 C14orf79Q96F83 325 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 MRGPRX4Q96LA9 322 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 LURAP1Q96LR2 239 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 ZNF559Q9BR84 538 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 PRRG4Q9BZD6 226 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.2□□□□□ -0.46
SNX3-204ENST00000426155 RLIMQ9NVW2 624 aa12.2□□□□□ -0.46
SNX3-204ENST00000426155 AKAP9Q99996 3911 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 NID1P14543 1247 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 IL7RP16871 459 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 PGCP20142 388 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 ADH6P28332 368 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 SSTR2P30874 369 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 KIR2DL3P43628 341 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 TXNL4AP83876 142 aaKnown RBP12.19□□□□□ -0.46
SNX3-204ENST00000426155 ZNF239Q16600 458 aaKnown RBP12.19□□□□□ -0.46
SNX3-204ENST00000426155 PLEKHM3Q6ZWE6 761 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 RETREG3Q86VR2 466 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 ARFGAP2Q8N6H7 521 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 ZNF563Q8TA94 476 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 ABHD3Q8WU67 409 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 ST8SIA1Q92185 356 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 MED4Q9NPJ6 270 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 EXOSC3Q9NQT5 275 aaKnown RBP12.19□□□□□ -0.46
SNX3-204ENST00000426155 CTPS2Q9NRF8 586 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 STOML1Q9UBI4 398 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 KCNN3Q9UGI6 736 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 MCTS1Q9ULC4 181 aaKnown RBP12.19□□□□□ -0.46
SNX3-204ENST00000426155 FREM1Q5H8C1 2179 aa12.19□□□□□ -0.46
SNX3-204ENST00000426155 A0A1W2PP18 115 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 A8MXE2 369 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 SYNGR4O95473 234 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CGAP01215 116 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CRHP06850 196 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 DBIP07108 87 aaKnown RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 VIMP08670 466 aaKnown RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 GKN3PP0CG01 181 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 FCGR2AP12318 317 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CCNA2P20248 432 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 IDH2P48735 452 aaKnown RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 CRISP3P54108 245 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CARD18P57730 90 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 SELPLGQ14242 412 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 C3orf33Q6P1S2 294 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 ZNF474Q6S9Z5 364 aaPredicted RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 DLEU7Q6UYE1 221 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 FAM214BQ7L5A3 538 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 OR52P1PQ8NH57 321 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 NFKBIDQ8NI38 313 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 RNF128Q8TEB7 428 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 OIT3Q8WWZ8 545 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 NRGNQ92686 78 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 LRRC46Q96FV0 321 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 OR5B2Q96R09 309 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CPPED1Q9BRF8 314 aaPredicted RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 SIKE1Q9BRV8 207 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 CCDC106Q9BWC9 280 aa12.18□□□□□ -0.46
SNX3-204ENST00000426155 RSPO3Q9BXY4 272 aaPredicted RBP12.18□□□□□ -0.46
SNX3-204ENST00000426155 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms