RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CD96P40200 585 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ARG2P78540 354 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 PMS2P3Q13401 168 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 PODNL1Q6PEZ8 512 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 KLHL17Q6TDP4 642 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 IGFL2Q6UWQ7 119 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 VRK2Q86Y07 508 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RBM45Q8IUH3 476 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 LACC1Q8IV20 430 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ENTHD1Q8IYW4 607 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ARMC10Q8N2F6 343 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF540Q8NDQ6 660 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 SLC7A13Q8TCU3 470 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 GTPBP3Q969Y2 492 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 TMIGD2Q96BF3 282 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 BBC3Q96PG8 261 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RASL10BQ96S79 203 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 UBL7Q96S82 380 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 NXF5Q9H1B4 397 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 SLC25A18Q9H1K4 315 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 KRCC1Q9NPI7 259 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 MKLN1Q9UL63 735 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 CFL2Q9Y281 166 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 YARS2Q9Y2Z4 477 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ZFYVE26Q68DK2 2539 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ZAR1LA6NP61 321 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 FMO6PO60774 539 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 FAM20BO75063 409 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 CYP7B1O75881 506 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RPS4Y1P22090 263 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 EPHA2P29317 976 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 GABRA3P34903 492 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 SSR4P51571 173 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RGS8P57771 180 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 SLC35A2P78381 396 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 OC90Q02509 493 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF155Q12901 538 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RAB39AQ14964 217 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 PTGES3Q15185 160 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 NPTX1Q15818 432 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 C1orf94Q6P1W5 598 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 PGBD2Q6P3X8 592 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 TUBA3EQ6PEY2 450 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 IL20RBQ6UXL0 311 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RRM2BQ7LG56 351 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RANBP3LQ86VV4 465 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 PRR22Q8IZ63 422 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ZADH2Q8N4Q0 377 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 TMEM156Q8N614 296 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RBMXL3Q8N7X1 1067 aaKnown RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ZNF441Q8N8Z8 693 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 OR13F1Q8NGS4 319 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 FAM81AQ8TBF8 368 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 HAS2Q92819 552 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 MYDGFQ969H8 173 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 Q96MT0 163 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 VSTM2LQ96N03 204 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 ABI3Q9P2A4 366 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RNF6Q9Y252 685 aa14.31□□□□□ -0.12
SHOX2-202ENST00000425436 GPR55Q9Y2T6 319 aaPredicted RBP14.31□□□□□ -0.12
SHOX2-202ENST00000425436 RGS10O43665 173 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 KIAA0513O60268 411 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 SEC14L2O76054 403 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 NADKO95544 446 aaPredicted RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 CT45A8P0DMV1 189 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 CT45A9P0DMV2 189 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 NID1P14543 1247 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 POU2F1P14859 743 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 PAX7P23759 505 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 CHMP24386 653 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 DCKP27707 260 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 SOX3P41225 446 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 PPICP45877 212 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 IDH2P48735 452 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 PSMD4P55036 377 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 TMBIM6P55061 237 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 EEF1A1P68104 462 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 SEC23BQ15437 767 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 NEDD8Q15843 81 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 DECR1Q16698 335 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 CT45A2Q5DJT8 189 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 SPINK14Q6IE38 97 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 IGFL3Q6UXB1 125 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 PRSS48Q7RTY5 328 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 CLVS1Q8IUQ0 354 aaPredicted RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 CCDC71Q8IV32 467 aaPredicted RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 ERI1Q8IV48 349 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 OR4N2Q8NGD1 307 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 GNPDA2Q8TDQ7 276 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 OIT3Q8WWZ8 545 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 ASB15Q8WXK1 588 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 SLC35B4Q969S0 331 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 TP53INP1Q96A56 240 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 NMD3Q96D46 503 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 ZG16BQ96DA0 208 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 WBP1Q96G27 269 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 LCORQ96JN0 433 aaPredicted RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 SIGLEC12Q96PQ1 595 aa14.3□□□□□ -0.12
SHOX2-202ENST00000425436 UTP23Q9BRU9 249 aaKnown RBP14.3□□□□□ -0.12
SHOX2-202ENST00000425436 G6PC3Q9BUM1 346 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms