RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZNF628Q5EBL2 1059 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 LYSMD4Q5XG99 296 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 ZNF619Q8N2I2 560 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 TMEM105Q8N8V8 129 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 GDPD1Q8N9F7 314 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 CAMKVQ8NCB2 501 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 OR13C2Q8NGS9 318 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 C1orf216Q8TAB5 229 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 FLVCR1-AS1Q8TAF5 88 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 SMAP2Q8WU79 429 aaPredicted RBP9.87□□□□□ -0.83
CUX1-205ENST00000425244 CD180Q99467 661 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 IFT27Q9BW83 186 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 HCAR1Q9BXC0 346 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 BEX2Q9BXY8 128 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 RBCK1Q9BYM8 510 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 ISYNA1Q9NPH2 558 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 GPR27Q9NS67 375 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 HRASLS2Q9NWW9 162 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 SIDT1Q9NXL6 827 aaKnown RBP9.87□□□□□ -0.83
CUX1-205ENST00000425244 SLC22A7Q9Y694 548 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 ASXL3Q9C0F0 2248 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 GXYLT2A0PJZ3 443 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 M0R296 226 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 HRO43593 1189 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 NME1P15531 152 aaKnown RBP9.87□□□□□ -0.83
CUX1-205ENST00000425244 ZNF10P21506 573 aaPredicted RBP9.87□□□□□ -0.83
CUX1-205ENST00000425244 FGF9P31371 208 aaPredicted RBP9.87□□□□□ -0.83
CUX1-205ENST00000425244 PPP3R1P63098 170 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 DUSP8Q13202 625 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 ASAH1Q13510 395 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 P2RY14Q15391 338 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 USP53Q70EK8 1073 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 GLCCI1Q86VQ1 547 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 Q8N402 240 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 TMEM99Q8N816 258 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 DTX3Q8N9I9 347 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 C19orf18Q8NEA5 215 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 OR51A7Q8NH64 312 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 TMEM239Q8WW34 195 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 PRSS27Q9BQR3 290 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 ZNF350Q9GZX5 532 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 PIGUQ9H490 435 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 ZNF304Q9HCX3 659 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 MED17Q9NVC6 651 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 KCNE5Q9UJ90 142 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 CACNA1EQ15878 2313 aa9.87□□□□□ -0.83
CUX1-205ENST00000425244 TRAV27A0A087WT01 109 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 FAM25AB3EWG3 89 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 FAM25CB3EWG5 89 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 FAM25GB3EWG6 89 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CRYZL1O95825 349 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CFIP05156 583 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 DBIP07108 87 aaKnown RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 LSSP48449 732 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 NXPH1P58417 271 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 HNRNPKP61978 463 aaKnown RBP eCLIP9.86□□□□□ -0.831e-6■■■■□ 24.1
CUX1-205ENST00000425244 LCN1P1Q5VSP4 162 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CD200R1LQ6Q8B3 271 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ARIH2OSQ8N7S6 290 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 FAM181AQ8N9Y4 354 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 RSC1A1Q92681 617 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 HS6ST2Q96MM7 605 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ATF6BQ99941 703 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ZFYVE21Q9BQ24 234 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 TTYH2Q9BSA4 534 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ALG8Q9BVK2 526 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 DUSP15Q9H1R2 295 aaPredicted RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 MOV10Q9HCE1 1003 aaKnown RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 NPAP1Q9NZP6 1156 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 NUFIP1Q9UHK0 495 aaKnown RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 C19orf53Q9UNZ5 99 aaPredicted RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 SPACA6W5XKT8 324 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 SPTBP11277 2137 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 DAPL1A0PJW8 107 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 HYAL3O43820 417 aaPredicted RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 IGHA1P01876 353 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 MYL9P24844 172 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 INPP1P49441 399 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 VSX2P58304 361 aaPredicted RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 IFITM2Q01629 132 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 NIPAL3Q6P499 406 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ARL9Q6T311 187 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 THSD4Q6ZMP0 1018 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 GKN2Q86XP6 184 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 MAML2Q8IZL2 1156 aaPredicted RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 ACBD7Q8N6N7 88 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 LSMEM1Q8N8F7 131 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CYB561A3Q8NBI2 242 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 DNASE2BQ8WZ79 361 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 TM4SF19Q96DZ7 209 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 CCDC3Q9BQI4 270 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 ZNF649Q9BS31 505 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 TTTY10Q9BZA0 68 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 EVA1BQ9NVM1 165 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 NTMQ9P121 344 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 EXOGQ9Y2C4 368 aaKnown RBP9.86□□□□□ -0.83
CUX1-205ENST00000425244 A6NL46 340 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 SGK494L7N484 410 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 GNB5O14775 395 aa9.86□□□□□ -0.83
CUX1-205ENST00000425244 PLA2G10O15496 165 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms