RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 SLC38A5Q8WUX1 472 aa16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 CNOT9Q92600 299 aaKnown RBP16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 SIKE1Q9BRV8 207 aa16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 ACER3Q9NUN7 267 aa16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 GALNT8Q9NY28 637 aa16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 DCTN4Q9UJW0 460 aa16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 MCTS1Q9ULC4 181 aaKnown RBP16.03■□□□□ 0.16
IGHV3-47-201ENST00000425060 GJE1A6NN92 205 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 CLIC1O00299 241 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 NR5A2O00482 541 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 NUDT7P0C024 238 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 CD8BP10966 210 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 ZNF474Q6S9Z5 364 aaPredicted RBP16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 PLEKHM3Q6ZWE6 761 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 ZZZ3Q8IYH5 903 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 CNEP1R1Q8N9A8 125 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 FAM222BQ8WU58 562 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 TMEM234Q8WY98 164 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 SRXN1Q9BYN0 137 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 NPHS2Q9NP85 383 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 THUMPD1Q9NXG2 353 aaKnown RBP16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 DNAJB12Q9NXW2 375 aaKnown RBP16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 VAPAQ9P0L0 249 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 P2RX2Q9UBL9 471 aa16.02■□□□□ 0.16
IGHV3-47-201ENST00000425060 CREBBPQ92793 2442 aa16.02■□□□□ 0.15
IGHV3-47-201ENST00000425060 MPDZO75970 2070 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 A0A1W2PP18 115 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 SS18L1O75177 396 aaPredicted RBP16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 SYNGR4O95473 234 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 BCHEP06276 602 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 DBIP07108 87 aaKnown RBP16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 CRISP3P54108 245 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 SIRPAP78324 504 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 FADDQ13158 208 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 DAZAP2Q15038 168 aaPredicted RBP16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 ZNF239Q16600 458 aaKnown RBP16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 C10orf111Q8N326 155 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 ARFGAP2Q8N6H7 521 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 LINC01560Q8TB33 94 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 WDR60Q8WVS4 1066 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 ROBO4Q8WZ75 1007 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 GMPPAQ96IJ6 420 aaPredicted RBP16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 CCDC106Q9BWC9 280 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 PRRG4Q9BZD6 226 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 OPN3Q9H1Y3 402 aaPredicted RBP16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 RABEP2Q9H5N1 569 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 PLSCR4Q9NRQ2 329 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 CALML5Q9NZT1 146 aa16.01■□□□□ 0.15
IGHV3-47-201ENST00000425060 CSMD2Q7Z408 3487 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 TUBAL3A6NHL2 446 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 FAAHO00519 579 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 CTAG2O75638 210 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 EPXP11678 715 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 IL7RP16871 459 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 RYKP34925 604 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 CPA2P48052 419 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 RAC3P60763 192 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 MRPL2Q5T653 305 aaKnown RBP16■□□□□ 0.15
IGHV3-47-201ENST00000425060 METTL21CQ5VZV1 264 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 C3orf33Q6P1S2 294 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 DLEU7Q6UYE1 221 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 PEX5LQ8IYB4 626 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 ZNF610Q8N9Z0 462 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 ATP6V1C2Q8NEY4 427 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 OR52P1PQ8NH57 321 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 RNF128Q8TEB7 428 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 CPNE4Q96A23 557 aaPredicted RBP16■□□□□ 0.15
IGHV3-47-201ENST00000425060 TMEM19Q96HH6 336 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 RAD21L1Q9H4I0 556 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 BCL2L10Q9HD36 194 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 TIGARQ9NQ88 270 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 GLRX2Q9NS18 164 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 CLEC4AQ9UMR7 237 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 CHST2Q9Y4C5 530 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 POLQO75417 2590 aa16■□□□□ 0.15
IGHV3-47-201ENST00000425060 A0A0G2JND7 137 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 A0A0G2JPF8 293 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 A0A1W2PNR3 127 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 HNRNPCL2B2RXH8 293 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 HNRNPCL3B7ZW38 293 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 AP3D1O14617 1153 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 HNRNPCL1O60812 293 aaKnown RBP15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 SMNDC1O75940 238 aaKnown RBP eCLIP15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 HNRNPCL4P0DMR1 293 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 NCF2P19878 526 aaPredicted RBP15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 APOBEC1P41238 236 aaKnown RBP15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 FAM27E3Q08E93 113 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 MERTKQ12866 999 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 EPS8Q12929 822 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 RPS26P11Q5JNZ5 115 aaPredicted RBP15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 PRAMEF8Q5VWM4 474 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 PRAMEF7Q5VXH5 474 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 CGB2Q6NT52 195 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 PPP4R4Q6NUP7 873 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 ZNF836Q6ZNA1 936 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 GRINAQ7Z429 371 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 VRK2Q86Y07 508 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 ADGRG3Q86Y34 549 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 OR6K3Q8NGY3 331 aa15.99■□□□□ 0.15
IGHV3-47-201ENST00000425060 ZNF563Q8TA94 476 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms