RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 C12orf66Q96MD2 445 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF559Q9BR84 538 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 DUSP22Q9NRW4 184 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 APOBEC3BQ9UH17 382 aaKnown RBP14.1□□□□□ -0.15
C9orf3-204ENST00000424143 C19orf53Q9UNZ5 99 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-204ENST00000424143 NTNG1Q9Y2I2 539 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 MED31Q9Y3C7 131 aa14.1□□□□□ -0.15
C9orf3-204ENST00000424143 ARPC4-TTLL3A0A0A6YYG9 625 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 CDHR4A6H8M9 788 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 GABARAPH6UMI1 98 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 PDCD5O14737 125 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 REM1O75628 298 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 OR7A10O76100 309 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 SMIM10L1P0DMW3 83 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 IFI30P13284 250 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 ATF1P18846 271 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 LCN1P31025 176 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 DGCR2P98153 550 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 TNFRSF17Q02223 184 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 EXOSC2Q13868 293 aaKnown RBP14.09□□□□□ -0.15
C9orf3-204ENST00000424143 CDK5R1Q15078 307 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 UAP1L1Q3KQV9 507 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 OLFML2AQ68BL7 652 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 ARHGAP11AQ6P4F7 1023 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 KIAA1324Q6UXG2 1013 aaKnown RBP14.09□□□□□ -0.15
C9orf3-204ENST00000424143 IL20RBQ6UXL0 311 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 B3GLCTQ6Y288 498 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 COMMD7Q86VX2 200 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 TIGD4Q8IY51 512 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 MRPL43Q8N983 215 aaKnown RBP14.09□□□□□ -0.15
C9orf3-204ENST00000424143 SLC16A11Q8NCK7 471 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 OR7G2Q8NG99 324 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 OR4C6Q8NH72 309 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 GIMAP1Q8WWP7 306 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 NXPE3Q969Y0 559 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 SMIM10Q96HG1 83 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 RBP7Q96R05 134 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 C1QTNF7Q9BXJ2 289 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 DPH1Q9BZG8 443 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 KIR3DX1Q9H7L2 352 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 NRIP3Q9NQ35 241 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 HEBP2Q9Y5Z4 205 aa14.09□□□□□ -0.15
C9orf3-204ENST00000424143 SNRPGP15A8MWD9 76 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 G3V3Q6 166 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 TSC22D2O75157 780 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 MPC2O95563 127 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 NTN1O95631 604 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 GIPP09681 153 aaPredicted RBP14.08□□□□□ -0.15
C9orf3-204ENST00000424143 CD3GP09693 182 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 UBL4AP11441 157 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 PSMB1P20618 241 aaKnown RBP14.08□□□□□ -0.15
C9orf3-204ENST00000424143 HTR2AP28223 471 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 CALCRP30988 508 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 SLC6A6P31641 620 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 SRP9P49458 86 aaKnown RBP14.08□□□□□ -0.15
C9orf3-204ENST00000424143 RPS15AP62244 130 aaKnown RBP14.08□□□□□ -0.15
C9orf3-204ENST00000424143 SLC3A1Q07837 685 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 RPE65Q16518 533 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 ISXQ2M1V0 245 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 FHL5Q5TD97 284 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 MTSS1LQ765P7 747 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 C12orf40Q86WS4 652 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 C17orf47Q8NEP4 570 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 OR4K14Q8NGD5 310 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 OR51Q1Q8NH59 317 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 CDS1Q92903 461 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 BPIFA2Q96DR5 249 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 NRTNQ99748 197 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF426Q9BUY5 554 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 IFT27Q9BW83 186 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 HCAR1Q9BXC0 346 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 TWSG1Q9GZX9 223 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 EQTNQ9NQ60 294 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 PHPT1Q9NRX4 125 aaPredicted RBP14.08□□□□□ -0.15
C9orf3-204ENST00000424143 TM7SF3Q9NS93 570 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 POMT2Q9UKY4 750 aa14.08□□□□□ -0.15
C9orf3-204ENST00000424143 ABT1Q9ULW3 272 aaKnown RBP14.08□□□□□ -0.15
C9orf3-204ENST00000424143 ZNF879B4DU55 563 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 J3QLW9 94 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 LDOC1O95751 146 aaPredicted RBP14.08□□□□□ -0.16
C9orf3-204ENST00000424143 IFNA16P05015 189 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 C8orf89P0DMQ9 161 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 PRG2P13727 222 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 IL9P15248 144 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 ZNF19P17023 458 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 PRKACBP22694 351 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 CA8P35219 290 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 MAP3K8P41279 467 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 OR12D2P58182 307 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 NTHL1P78549 312 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 ZNF234Q14588 700 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 GAB4Q2WGN9 574 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 FAM27D1Q5T7N8 215 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 FAAH2Q6GMR7 532 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 NLRC3Q7RTR2 1065 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 PAQR7Q86WK9 346 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 ZNF578Q96N58 590 aaPredicted RBP14.08□□□□□ -0.16
C9orf3-204ENST00000424143 SERINC2Q96SA4 455 aa14.08□□□□□ -0.16
C9orf3-204ENST00000424143 DPCDQ9BVM2 203 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms