RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SLC25A53Q5H9E4 307 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 LRIF1Q5T3J3 769 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 GTF2IRD2BQ6EKJ0 949 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 C3orf33Q6P1S2 294 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 POMZP3Q6PJE2 187 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 HMGN2P46Q86SG4 172 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 GTF2IRD2Q86UP8 949 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 ACBD4Q8NC06 268 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 FAM71CQ8NEG0 241 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 ATP6V1C2Q8NEY4 427 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 OR52P1PQ8NH57 321 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 OSTF1Q92882 214 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 ZG16BQ96DA0 208 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 C14orf79Q96F83 325 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 TREX2Q9BQ50 279 aaPredicted RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 ZNF559Q9BR84 538 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 RBM24Q9BX46 236 aaKnown RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 TMEM120AQ9BXJ8 343 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 TRIM8Q9BZR9 551 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 QRSL1Q9H0R6 528 aaKnown RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 FGFR1OP2Q9NVK5 253 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 KCNN3Q9UGI6 736 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 LEF1Q9UJU2 399 aaPredicted RBP9.83□□□□□ -0.84
USP49-204ENST00000423567 NDUFAF1Q9Y375 327 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 EMC9Q9Y3B6 208 aa9.83□□□□□ -0.84
USP49-204ENST00000423567 A0A0G2JPF8 293 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 A0A0J9YW62 118 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 HNRNPCL2B2RXH8 293 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 HNRNPCL3B7ZW38 293 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 HNRNPCL1O60812 293 aaKnown RBP9.82□□□□□ -0.84
USP49-204ENST00000423567 SMNDC1O75940 238 aaKnown RBP eCLIP9.82□□□□□ -0.84
USP49-204ENST00000423567 TFPTP0C1Z6 253 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 HNRNPCL4P0DMR1 293 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 PRF1P14222 555 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 NID1P14543 1247 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 IL11P20809 199 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 KIR2DL3P43628 341 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 HTR3AP46098 478 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 CTBP2P56545 445 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 SESN3P58005 492 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 SIRPAP78324 504 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 TLE4Q04727 773 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 MERTKQ12866 999 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 CTU2Q2VPK5 515 aaKnown RBP9.82□□□□□ -0.84
USP49-204ENST00000423567 PAGE3Q5JUK9 113 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 PRAMEF8Q5VWM4 474 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 PRAMEF7Q5VXH5 474 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 LUZP2Q86TE4 346 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 ZNF440Q8IYI8 595 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 BBS10Q8TAM1 723 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 SLC25A43Q8WUT9 341 aaPredicted RBP9.82□□□□□ -0.84
USP49-204ENST00000423567 SLC38A5Q8WUX1 472 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 CPNE4Q96A23 557 aaPredicted RBP9.82□□□□□ -0.84
USP49-204ENST00000423567 TMEM19Q96HH6 336 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 ADGRG7Q96K78 797 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 NPAS1Q99742 590 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 KLHDC3Q9BQ90 382 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 RNF122Q9H9V4 155 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 GLRX2Q9NS18 164 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 ACER3Q9NUN7 267 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 JKAMPQ9P055 326 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 PROCRQ9UNN8 238 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 ZNF232Q9UNY5 417 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 IFT52Q9Y366 437 aa9.82□□□□□ -0.84
USP49-204ENST00000423567 MED12Q93074 2177 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 CACNA1CQ13936 2221 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 CFAP73A6NFT4 308 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 TUBAL3A6NHL2 446 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 CLDN24A6NM45 220 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 ETV2O00321 342 aaPredicted RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 MSTNO14793 375 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 DNAJA2O60884 412 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 TNFSF13O75888 250 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 AQP8O94778 261 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 NTN1O95631 604 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 RPS4Y1P22090 263 aaKnown RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 FKBP2P26885 142 aaKnown RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 CPOXP36551 454 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 APOBEC1P41238 236 aaKnown RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 KCNJ5P48544 419 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 DLX5P56178 289 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 COPZ1P61923 177 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 SORDQ00796 357 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 GCNT6Q5T4J0 391 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 MRPL2Q5T653 305 aaKnown RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 PLEKHM3Q6ZWE6 761 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 FAM214BQ7L5A3 538 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 GRINAQ7Z429 371 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 DHDDSQ86SQ9 333 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 KRT73Q86Y46 540 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 ZNF295-AS1Q8N0V1 137 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 TSPEARQ8WU66 669 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 CNOT9Q92600 299 aaKnown RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 GMPPAQ96IJ6 420 aaPredicted RBP9.81□□□□□ -0.84
USP49-204ENST00000423567 SLC39A3Q9BRY0 314 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 MCCC2Q9HCC0 563 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 A4GALTQ9NPC4 353 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 FANCFQ9NPI8 374 aa9.81□□□□□ -0.84
USP49-204ENST00000423567 SLC52A3Q9NQ40 469 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms