RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SLC25A53Q5H9E4 307 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 COX20Q5RI15 118 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 GTF2IRD2BQ6EKJ0 949 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 LRRC74BQ6ZQY2 392 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 HMGN2P46Q86SG4 172 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 GTF2IRD2Q86UP8 949 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 ZNF563Q8TA94 476 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 ZFP90Q8TF47 636 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 CKAP2Q8WWK9 683 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 CPNE4Q96A23 557 aaPredicted RBP19.62■□□□□ 0.73
TRAF4-204ENST00000422344 MAGEB18Q96M61 343 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 EBF4Q9BQW3 602 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 GPATCH1Q9BRR8 931 aaKnown RBP19.62■□□□□ 0.73
TRAF4-204ENST00000422344 SERINC1Q9NRX5 453 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 GLRX2Q9NS18 164 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 SLC6A13Q9NSD5 602 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 P2RX2Q9UBL9 471 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 NDRG3Q9UGV2 375 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 CLEC4AQ9UMR7 237 aa19.62■□□□□ 0.73
TRAF4-204ENST00000422344 NTN1O95631 604 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 CD8BP10966 210 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 SHC1P29353 583 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 PGM1P36871 562 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 KCNJ10P78508 379 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 AP1ARQ63HQ0 302 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 ARFGAP2Q8N6H7 521 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 OR6K3Q8NGY3 331 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 QRSL1Q9H0R6 528 aaKnown RBP19.61■□□□□ 0.73
TRAF4-204ENST00000422344 CLEC4MQ9H2X3 399 aaPredicted RBP19.61■□□□□ 0.73
TRAF4-204ENST00000422344 MTHFD2LQ9H903 347 aaPredicted RBP19.61■□□□□ 0.73
TRAF4-204ENST00000422344 TPT1P8Q9HAU6 139 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 ELOVL5Q9NYP7 299 aa19.61■□□□□ 0.73
TRAF4-204ENST00000422344 SH3D21A4FU49 640 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 TMEM247A6NEH6 219 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CASKO14936 926 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 EFNA2O43921 213 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 SS18L1O75177 396 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CHRM4P08173 479 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 POU2F1P14859 743 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 RYKP34925 604 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CD79BP40259 229 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 MRPL19P49406 292 aaKnown RBP19.6■□□□□ 0.73
TRAF4-204ENST00000422344 SESN3P58005 492 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 MERTKQ12866 999 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 DAZAP2Q15038 168 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-204ENST00000422344 C3orf33Q6P1S2 294 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CMIPQ8IY22 773 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 FAM71CQ8NEG0 241 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 WDR60Q8WVS4 1066 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 ZG16BQ96DA0 208 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 DACH2Q96NX9 599 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 SLC38A1Q9H2H9 487 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CACYBPQ9HB71 228 aaKnown RBP19.6■□□□□ 0.73
TRAF4-204ENST00000422344 RASSF1Q9NS23 344 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CCM2LQ9NUG4 571 aaPredicted RBP19.6■□□□□ 0.73
TRAF4-204ENST00000422344 THUMPD1Q9NXG2 353 aaKnown RBP19.6■□□□□ 0.73
TRAF4-204ENST00000422344 CALML5Q9NZT1 146 aa19.6■□□□□ 0.73
TRAF4-204ENST00000422344 AGAP5A6NIR3 686 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 ETV2O00321 342 aaPredicted RBP19.59■□□□□ 0.73
TRAF4-204ENST00000422344 DNAJA2O60884 412 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 SASH3O75995 380 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 DBIP07108 87 aaKnown RBP19.59■□□□□ 0.73
TRAF4-204ENST00000422344 ETFAP13804 333 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 IL7RP16871 459 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 DSTNP60981 165 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 IRX1P78414 480 aaPredicted RBP19.59■□□□□ 0.73
TRAF4-204ENST00000422344 FAM27E3Q08E93 113 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 GUSBP1Q15486 140 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 ZNF239Q16600 458 aaKnown RBP19.59■□□□□ 0.73
TRAF4-204ENST00000422344 GTDC1Q4AE62 458 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 SLC2A7Q6PXP3 512 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 PEX5LQ8IYB4 626 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 ZNF610Q8N9Z0 462 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 ROBO4Q8WZ75 1007 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 PMM1Q92871 262 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 FOXC2Q99958 501 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 RAD21L1Q9H4I0 556 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 EXOSC3Q9NQT5 275 aaKnown RBP19.59■□□□□ 0.73
TRAF4-204ENST00000422344 ACER3Q9NUN7 267 aa19.59■□□□□ 0.73
TRAF4-204ENST00000422344 SPIN1Q9Y657 262 aaPredicted RBP19.59■□□□□ 0.73
TRAF4-204ENST00000422344 NR5A2O00482 541 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 CGAP01215 116 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 PCYT1AP49585 367 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 RNPS1Q15287 305 aaKnown RBP19.58■□□□□ 0.72
TRAF4-204ENST00000422344 EXOC3L2Q2M3D2 409 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF474Q6S9Z5 364 aaPredicted RBP19.58■□□□□ 0.72
TRAF4-204ENST00000422344 PLEKHM3Q6ZWE6 761 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 TGIF2LYQ8IUE0 185 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 GTF2H4Q92759 462 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF524Q96C55 264 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 AURKBQ96GD4 344 aaPredicted RBP19.58■□□□□ 0.72
TRAF4-204ENST00000422344 OR5B2Q96R09 309 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 SRXN1Q9BYN0 137 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 CXXC4Q9H2H0 198 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 FANCFQ9NPI8 374 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 CCDC167Q9P0B6 97 aa19.58■□□□□ 0.72
TRAF4-204ENST00000422344 FAM221AA4D161 298 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 CLDN24A6NM45 220 aa19.57■□□□□ 0.72
TRAF4-204ENST00000422344 BCAS1O75363 584 aaPredicted RBP19.57■□□□□ 0.72
TRAF4-204ENST00000422344 GOSR1O95249 250 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms