RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 BTNL2Q9UIR0 455 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 MKLN1Q9UL63 735 aa22.58■■□□□ 1.21
VEGFA-208ENST00000417285 SLC7A1P30825 629 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 KHKP50053 298 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 CCR4P51679 360 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 CASP9P55211 416 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 UFM1P61960 85 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 QPRTQ15274 297 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 HEPHL1Q6MZM0 1159 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 TNFAIP8L2Q6P589 184 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-208ENST00000417285 EIF3MQ7L2H7 374 aaKnown RBP22.57■■□□□ 1.2
VEGFA-208ENST00000417285 TUSC5Q8IXB3 177 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 TRIML2Q8N7C3 387 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 ATP6V1C2Q8NEY4 427 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 ABHD3Q8WU67 409 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 XAGE5Q8WWM1 108 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 ST8SIA1Q92185 356 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 TLCD1Q96CP7 247 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 POM121Q96HA1 1249 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 CCDC115Q96NT0 180 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 HS3ST6Q96QI5 342 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 ZBTB18Q99592 522 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 USB1Q9BQ65 265 aaKnown RBP22.57■■□□□ 1.2
VEGFA-208ENST00000417285 SLC35A5Q9BS91 424 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 THUMPD3Q9BV44 507 aaKnown RBP22.57■■□□□ 1.2
VEGFA-208ENST00000417285 ACTR6Q9GZN1 396 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 GSX1Q9H4S2 264 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-208ENST00000417285 TMBIM4Q9HC24 238 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 SERINC1Q9NRX5 453 aa22.57■■□□□ 1.2
VEGFA-208ENST00000417285 ZNF469Q96JG9 3925 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-208ENST00000417285 KITP10721 976 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 EPHA3P29320 983 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 LRRC74AQ0VAA2 488 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 PLEKHM3Q6ZWE6 761 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 KRTAP1-3Q8IUG1 177 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 TMEM234Q8WY98 164 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 TEX37Q96LM6 180 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 WDR55Q9H6Y2 383 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-208ENST00000417285 MANSC1Q9H8J5 431 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 KCNE5Q9UJ90 142 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 WDR45Q9Y484 360 aa22.56■■□□□ 1.2
VEGFA-208ENST00000417285 GOLGA8QA0A0J9YX86 632 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.55■■□□□ 1.2
VEGFA-208ENST00000417285 GOLGA8OA6NCC3 632 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 GOLGA8NF8WBI6 632 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 KIAA0513O60268 411 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 UGT2B17O75795 530 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 CYP7B1O75881 506 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 CSTAP01040 98 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 PGCP20142 388 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 SKP2Q13309 424 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 P2RY6Q15077 328 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 TIGD2Q4W5G0 525 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 RAB8BQ92930 207 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 PANX1Q96RD7 426 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 COQ10BQ9H8M1 238 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 KLHL9Q9P2J3 617 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 GPR45Q9Y5Y3 372 aa22.55■■□□□ 1.2
VEGFA-208ENST00000417285 TMCC2O75069 709 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 PGRP06401 933 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 INHBBP09529 407 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 HPCAP84074 193 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 NXNQ6DKJ4 435 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 C3orf33Q6P1S2 294 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 TFAP2EQ6VUC0 442 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 OLIG3Q7RTU3 272 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 NUFIP2Q7Z417 695 aaKnown RBP22.54■■□□□ 1.2
VEGFA-208ENST00000417285 GABRG1Q8N1C3 465 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 GLB1L3Q8NCI6 653 aaPredicted RBP22.54■■□□□ 1.2
VEGFA-208ENST00000417285 HSD17B8Q92506 261 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 ROPN1LQ96C74 230 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 OR52E6Q96RD3 313 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 SAP130Q9H0E3 1048 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 SLC35A3Q9Y2D2 325 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 VPS13CQ709C8 3753 aa22.54■■□□□ 1.2
VEGFA-208ENST00000417285 CCDC154A6NI56 674 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 FAM171A2A8MVW0 826 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 GCM2O75603 506 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-208ENST00000417285 ENPP1P22413 925 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 FKBP2P26885 142 aaKnown RBP22.53■■□□□ 1.2
VEGFA-208ENST00000417285 IL12AP29459 219 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 ADSLP30566 484 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-208ENST00000417285 ANXA11P50995 505 aaKnown RBP22.53■■□□□ 1.2
VEGFA-208ENST00000417285 SESN3P58005 492 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 TXNL4AP83876 142 aaKnown RBP22.53■■□□□ 1.2
VEGFA-208ENST00000417285 Q5PR19 223 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 SFRP5Q5T4F7 317 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 TYW3Q6IPR3 259 aaKnown RBP22.53■■□□□ 1.2
VEGFA-208ENST00000417285 WFDC8Q8IUA0 241 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 ZNF619Q8N2I2 560 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 ZNF524Q96C55 264 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 BCO1Q9HAY6 547 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 NGBQ9NPG2 151 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 ACER3Q9NUN7 267 aa22.53■■□□□ 1.2
VEGFA-208ENST00000417285 CENPVL1A0A0U1RR11 272 aa22.52■■□□□ 1.2
VEGFA-208ENST00000417285 C9JVG2 144 aa22.52■■□□□ 1.2
VEGFA-208ENST00000417285 UBTFL6P0CB48 400 aaPredicted RBP22.52■■□□□ 1.2
VEGFA-208ENST00000417285 IDO1P14902 403 aa22.52■■□□□ 1.2
VEGFA-208ENST00000417285 GPAT3Q53EU6 434 aa22.52■■□□□ 1.2
VEGFA-208ENST00000417285 ZNF704Q6ZNC4 412 aaPredicted RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms