RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 PUSL1Q8N0Z8 303 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 TBC1D19Q8N5T2 526 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF689Q96CS4 500 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 NIT2Q9NQR4 276 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CAMK2AQ9UQM7 478 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CCL26Q9Y258 94 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ANTXRLA6NF34 631 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR6C65A6NJZ3 312 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 MAGEB4O15481 346 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ECDO95905 644 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 F12P00748 615 aaPredicted RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 C8AP07357 584 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 HTR1FP30939 366 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DCTDP32321 178 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 RPL3P39023 403 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 H2BFSP57053 126 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 PDE7AQ13946 482 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 HES5Q5TA89 166 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CD300LDQ6UXZ3 194 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 NAXDQ8IW45 347 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CFAP206Q8IYR0 622 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 CMTM4Q8IZR5 234 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR6V1Q8N148 313 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 C2orf15Q8WU43 125 aaKnown RBP13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 ING5Q8WYH8 240 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 SCAMP4Q969E2 229 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 NEURL3Q96EH8 262 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 TCEAL4Q96EI5 215 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 DERL3Q96Q80 235 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 BCL2L14Q9BZR8 327 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 OPN4Q9UHM6 478 aa13.67□□□□□ -0.22
NCKIPSD-204ENST00000416649 UBE2QL1A1L167 161 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR2M5A3KFT3 312 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 RAB19A4D1S5 217 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 B4GALT2O60909 372 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 IGHA1P01876 353 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 LRG1P02750 347 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 STATHP02808 62 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 MPC1LP0DKB6 136 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 ALPPL2P10696 532 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 EN2P19622 333 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 IMPA1P29218 277 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 CLDN12P56749 244 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 NTHL1P78549 312 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 UBXN2BQ14CS0 331 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 BEX5Q5H9J7 111 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 FAM69AQ5T7M9 428 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR7E24Q6IFN5 339 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 SEZ6L2Q6UXD5 910 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF783Q6ZMS7 281 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 LDLRAD3Q86YD5 345 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 SPICQ8N5J4 248 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF433Q8N7K0 673 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 FAM71CQ8NEG0 241 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 TNFAIP8L1Q8WVP5 186 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 C4orf36Q96KX1 117 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 ANKRD19PQ9H560 264 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 DMRT3Q9NQL9 472 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 EMC3Q9P0I2 261 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 NTNG1Q9Y2I2 539 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 TRIOO75962 3097 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 PRAMEF27A3QJZ7 478 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 STX11O75558 287 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 S100A9P06702 114 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 GAAP10253 952 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 LAG3P18627 525 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 PPP2R1BP30154 601 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 GMFBP60983 142 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 AP1S1P61966 158 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 UBE2IP63279 158 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 ACSM1Q08AH1 577 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 DCAF12L2Q5VW00 463 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 ZNF704Q6ZNC4 412 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 CCDC36Q8IYA8 594 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 EIF4E3Q8N5X7 224 aaKnown RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR1M1Q8NGA1 313 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 THEM6Q8WUY1 208 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 LRIG1Q96JA1 1093 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 SAMD8Q96LT4 415 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 KLF16Q9BXK1 252 aaPredicted RBP13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 MYNNQ9NPC7 610 aa13.66□□□□□ -0.22
NCKIPSD-204ENST00000416649 CARNS1A5YM72 827 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR6C68A6NDL8 312 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 TMEM200CA6NKL6 621 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 FLRT2O43155 660 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 PRG2P13727 222 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 ADH7P40394 386 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 GCGRP47871 477 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 OR12D2P58182 307 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 SHC2P98077 582 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 RIPPLY1Q0D2K3 151 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 TSPAN31Q12999 210 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 RAB33AQ14088 237 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 SMAD2Q15796 467 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 SLCO4C1Q6ZQN7 724 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 TPRA1Q86W33 373 aa13.65□□□□□ -0.22
NCKIPSD-204ENST00000416649 LRRC56Q8IYG6 542 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms