RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 FKRPQ9H9S5 495 aa8.84□□□□□ -0.99
MDC1-202ENST00000416571 SERINC1Q9NRX5 453 aa8.84□□□□□ -0.99
MDC1-202ENST00000416571 DCDC2Q9UHG0 476 aa8.84□□□□□ -0.99
MDC1-202ENST00000416571 ING1Q9UK53 422 aaPredicted RBP8.84□□□□□ -0.99
MDC1-202ENST00000416571 FAF1Q9UNN5 650 aaPredicted RBP8.84□□□□□ -0.99
MDC1-202ENST00000416571 DTNAQ9Y4J8 743 aa8.84□□□□□ -0.99
MDC1-202ENST00000416571 FKBP7Q9Y680 259 aa8.84□□□□□ -0.99
MDC1-202ENST00000416571 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.83□□□□□ -12e-6■□□□□ 8.2
MDC1-202ENST00000416571 LOC100289279A0A1B0GTE1 492 aa8.83□□□□□ -1
MDC1-202ENST00000416571 A0A1W2PR80 420 aa8.83□□□□□ -1
MDC1-202ENST00000416571 SULT2B1O00204 365 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ZNF264O43296 627 aa8.83□□□□□ -1
MDC1-202ENST00000416571 OIP5O43482 229 aa8.83□□□□□ -1
MDC1-202ENST00000416571 CYP7B1O75881 506 aa8.83□□□□□ -1
MDC1-202ENST00000416571 IGHV3-9P01782 118 aa8.83□□□□□ -1
MDC1-202ENST00000416571 KRT16P08779 473 aa8.83□□□□□ -1
MDC1-202ENST00000416571 UBL4AP11441 157 aa8.83□□□□□ -1
MDC1-202ENST00000416571 NEFHP12036 1026 aa8.83□□□□□ -1
MDC1-202ENST00000416571 SDC1P18827 310 aa8.83□□□□□ -1
MDC1-202ENST00000416571 PRPH2P23942 346 aa8.83□□□□□ -1
MDC1-202ENST00000416571 IGFBP5P24593 272 aa8.83□□□□□ -1
MDC1-202ENST00000416571 EDNRAP25101 427 aa8.83□□□□□ -1
MDC1-202ENST00000416571 CD40P25942 277 aa8.83□□□□□ -1
MDC1-202ENST00000416571 FRKP42685 505 aaPredicted RBP8.83□□□□□ -1
MDC1-202ENST00000416571 ASMTP46597 345 aa8.83□□□□□ -1
MDC1-202ENST00000416571 PDLIM4P50479 330 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ATP12AP54707 1039 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ETF1P62495 437 aaKnown RBP8.83□□□□□ -1
MDC1-202ENST00000416571 RPL38P63173 70 aaKnown RBP8.83□□□□□ -1
MDC1-202ENST00000416571 SRSF2Q01130 221 aaKnown RBP8.83□□□□□ -1
MDC1-202ENST00000416571 TP53BP2Q13625 1128 aa8.83□□□□□ -1
MDC1-202ENST00000416571 SQLEQ14534 574 aa8.83□□□□□ -1
MDC1-202ENST00000416571 KIAA0040Q15053 153 aa8.83□□□□□ -1
MDC1-202ENST00000416571 QPRTQ15274 297 aa8.83□□□□□ -1
MDC1-202ENST00000416571 NDUFAF6Q330K2 333 aa8.83□□□□□ -1
MDC1-202ENST00000416571 SPDYE7PQ495Y7 208 aa8.83□□□□□ -1
MDC1-202ENST00000416571 TIGD2Q4W5G0 525 aa8.83□□□□□ -1
MDC1-202ENST00000416571 KLHL26Q53HC5 615 aa8.83□□□□□ -1
MDC1-202ENST00000416571 DCST2Q5T1A1 773 aa8.83□□□□□ -1
MDC1-202ENST00000416571 OR7E24Q6IFN5 339 aa8.83□□□□□ -1
MDC1-202ENST00000416571 SYT10Q6XYQ8 523 aa8.83□□□□□ -1
MDC1-202ENST00000416571 FRMD7Q6ZUT3 714 aa8.83□□□□□ -1
MDC1-202ENST00000416571 IL17RELQ6ZVW7 336 aa8.83□□□□□ -1
MDC1-202ENST00000416571 R3HCC1LQ7Z5L2 792 aaKnown RBP8.83□□□□□ -1
MDC1-202ENST00000416571 OR5W2Q8NH69 310 aa8.83□□□□□ -1
MDC1-202ENST00000416571 C3orf49Q96BT1 292 aa8.83□□□□□ -1
MDC1-202ENST00000416571 MTERF3Q96E29 417 aa8.83□□□□□ -1
MDC1-202ENST00000416571 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
MDC1-202ENST00000416571 TRMOQ9BU70 441 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ACTRT3Q9BYD9 372 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ANKZF1Q9H8Y5 726 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ASB6Q9NWX5 421 aa8.83□□□□□ -1
MDC1-202ENST00000416571 TAS2R16Q9NYV7 291 aa8.83□□□□□ -1
MDC1-202ENST00000416571 NOSIPQ9Y314 301 aaKnown RBP8.83□□□□□ -1
MDC1-202ENST00000416571 FIS1Q9Y3D6 152 aa8.83□□□□□ -1
MDC1-202ENST00000416571 ATP23Q9Y6H3 246 aa8.83□□□□□ -1
MDC1-202ENST00000416571 PLCE1Q9P212 2302 aa8.83□□□□□ -1
MDC1-202ENST00000416571 TGP01266 2768 aa8.82□□□□□ -1
MDC1-202ENST00000416571 NDUFS8O00217 210 aa8.82□□□□□ -1
MDC1-202ENST00000416571 GPR171O14626 319 aa8.82□□□□□ -1
MDC1-202ENST00000416571 KIAA0513O60268 411 aa8.82□□□□□ -1
MDC1-202ENST00000416571 EIF4E2O60573 245 aaKnown RBP8.82□□□□□ -1
MDC1-202ENST00000416571 GLRA3O75311 464 aa8.82□□□□□ -1
MDC1-202ENST00000416571 H6PDO95479 791 aa8.82□□□□□ -1
MDC1-202ENST00000416571 CHEK2O96017 543 aa8.82□□□□□ -1
MDC1-202ENST00000416571 TFPIP10646 304 aa8.82□□□□□ -1
MDC1-202ENST00000416571 APEHP13798 732 aaKnown RBP8.82□□□□□ -1
MDC1-202ENST00000416571 HPCAL1P37235 193 aa8.82□□□□□ -1
MDC1-202ENST00000416571 RPL3P39023 403 aaKnown RBP8.82□□□□□ -1
MDC1-202ENST00000416571 DIO1P49895 249 aa8.82□□□□□ -1
MDC1-202ENST00000416571 PDE7AQ13946 482 aa8.82□□□□□ -1
MDC1-202ENST00000416571 CARTPTQ16568 116 aa8.82□□□□□ -1
MDC1-202ENST00000416571 GALNTL6Q49A17 601 aa8.82□□□□□ -1
MDC1-202ENST00000416571 SLC25A53Q5H9E4 307 aa8.82□□□□□ -1
MDC1-202ENST00000416571 EXOSC6Q5RKV6 272 aaKnown RBP8.82□□□□□ -1
MDC1-202ENST00000416571 FAM120AOSQ5T036 256 aa8.82□□□□□ -1
MDC1-202ENST00000416571 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.82□□□□□ -1
MDC1-202ENST00000416571 CLEC6AQ6EIG7 209 aa8.82□□□□□ -1
MDC1-202ENST00000416571 ZYG11AQ6WRX3 759 aa8.82□□□□□ -1
MDC1-202ENST00000416571 B3GLCTQ6Y288 498 aa8.82□□□□□ -1
MDC1-202ENST00000416571 CNPY4Q8N129 248 aa8.82□□□□□ -1
MDC1-202ENST00000416571 CCDC63Q8NA47 563 aa8.82□□□□□ -1
MDC1-202ENST00000416571 OR56A1Q8NGH5 318 aa8.82□□□□□ -1
MDC1-202ENST00000416571 SLC25A43Q8WUT9 341 aaPredicted RBP8.82□□□□□ -1
MDC1-202ENST00000416571 TMEM234Q8WY98 164 aa8.82□□□□□ -1
MDC1-202ENST00000416571 ST8SIA1Q92185 356 aa8.82□□□□□ -1
MDC1-202ENST00000416571 THUMPD3Q9BV44 507 aaKnown RBP8.82□□□□□ -1
MDC1-202ENST00000416571 C1QTNF6Q9BXI9 259 aa8.82□□□□□ -1
MDC1-202ENST00000416571 SIRT3Q9NTG7 399 aaPredicted RBP8.82□□□□□ -1
MDC1-202ENST00000416571 BAIAP2L1Q9UHR4 511 aa8.82□□□□□ -1
MDC1-202ENST00000416571 TMED5Q9Y3A6 229 aa8.82□□□□□ -1
MDC1-202ENST00000416571 TRAF6Q9Y4K3 522 aa8.82□□□□□ -1
MDC1-202ENST00000416571 CCL27Q9Y4X3 112 aa8.82□□□□□ -1
MDC1-202ENST00000416571 PTGDR2Q9Y5Y4 395 aa8.82□□□□□ -1
MDC1-202ENST00000416571 SLC25A15Q9Y619 301 aa8.82□□□□□ -1
MDC1-202ENST00000416571 SPIN1Q9Y657 262 aaPredicted RBP8.82□□□□□ -1
MDC1-202ENST00000416571 MALRD1Q5VYJ5 2156 aa8.82□□□□□ -1
MDC1-202ENST00000416571 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
MDC1-202ENST00000416571 NPIPB8E9PQR5 432 aa8.81□□□□□ -1
MDC1-202ENST00000416571 G3V2L1 256 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms