RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 NPFFR2Q9Y5X5 522 aa13.33□□□□□ -0.27
SGCE-202ENST00000415788 FBXO45P0C2W1 286 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 CYB561P49447 251 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 POU6F2P78424 691 aaPredicted RBP13.33□□□□□ -0.28
SGCE-202ENST00000415788 DGCR6Q14129 220 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 COL28A1Q2UY09 1125 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 COX20Q5RI15 118 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 STEAP3Q658P3 488 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 C16orf47Q6ZP98 133 aaPredicted RBP13.33□□□□□ -0.28
SGCE-202ENST00000415788 LINC00696Q6ZRV3 163 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 CYP4Z1Q86W10 505 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 ZDHHC21Q8IVQ6 265 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 HORMAD2Q8N7B1 307 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 HTRA1Q92743 480 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 SLC35A4Q96G79 324 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 CRELD1Q96HD1 420 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 SIGLEC11Q96RL6 698 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 UTP23Q9BRU9 249 aaKnown RBP13.33□□□□□ -0.28
SGCE-202ENST00000415788 G6PC3Q9BUM1 346 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 TRIM45Q9H8W5 580 aaPredicted RBP13.33□□□□□ -0.28
SGCE-202ENST00000415788 NEK6Q9HC98 313 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 PTPRQQ9UMZ3 2332 aa13.33□□□□□ -0.28
SGCE-202ENST00000415788 PNMA8CA0A1B0GUJ8 204 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 A8MVJ9 347 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 HMGN4O00479 90 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 KCNK2O95069 426 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 OR12D1P0DN82 309 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 FPR1P21462 350 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 LCN1P31025 176 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
SGCE-202ENST00000415788 S100A5P33763 92 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 SOX3P41225 446 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 GZMMP51124 257 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 CASP9P55211 416 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 DSTNP60981 165 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 GNA13Q14344 377 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 OR2T5Q6IEZ7 315 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 C19orf48Q6RUI8 117 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 IGFL3Q6UXB1 125 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 C16orf62Q7Z3J2 963 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 SERPINA11Q86U17 422 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 KBTBD8Q8NFY9 601 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 OR2T29Q8NH02 315 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 CAPSLQ8WWF8 208 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 XAGE5Q8WWM1 108 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 PIK3R3Q92569 461 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 HAS2Q92819 552 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 CDS1Q92903 461 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 SPACA9Q96E40 222 aaPredicted RBP13.32□□□□□ -0.28
SGCE-202ENST00000415788 OMA1Q96E52 524 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 SGCZQ96LD1 299 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 PITX2Q99697 317 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 SPATA9Q9BWV2 254 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 IKZF5Q9H5V7 419 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 HPF1Q9NWY4 346 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 P2RX2Q9UBL9 471 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 NOX1Q9Y5S8 564 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 CHD8Q9HCK8 2581 aa13.32□□□□□ -0.28
SGCE-202ENST00000415788 OR6C70A6NIJ9 312 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 TBX1O43435 398 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 AIREO43918 545 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 PPM1BO75688 479 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 WDPCPO95876 746 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 APOA1P02647 267 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 C1QCP02747 245 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 KRT8P05787 483 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 GUSBP08236 651 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 ETFAP13804 333 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 TCEA1P23193 301 aaKnown RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 IL12BP29460 328 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 DAPP51397 102 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 PNLIPRP2P54317 469 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 EFR3AQ14156 821 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 NTRK2Q16620 822 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.31□□□□□ -0.28
SGCE-202ENST00000415788 ZNF791Q3KP31 576 aaPredicted RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 ARHGAP11BQ3KRB8 267 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 DCST2Q5T1A1 773 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 HEPHL1Q6MZM0 1159 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 LYPD8Q6UX82 237 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 BCORP1Q8N888 145 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 LILRB4Q8NHJ6 448 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 TTC9Q92623 222 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 DIO2Q92813 273 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 RAB8BQ92930 207 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 OTUB1Q96FW1 271 aaPredicted RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 POLE3Q9NRF9 147 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 MKLN1Q9UL63 735 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 PEX16Q9Y5Y5 336 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 ACACBO00763 2458 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 OR5H15A6NDH6 313 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 ZNF354AO60765 605 aaPredicted RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 MITFO75030 526 aaPredicted RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 TNFRSF21O75509 655 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 REM1O75628 298 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 IL33O95760 270 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 SFTPCP11686 197 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 RCVRNP35243 200 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms