RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 TOXO94900 526 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 NUP62P37198 522 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 HTR2BP41595 481 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 BDKRB1P46663 353 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MFAP5Q13361 173 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 KIF19Q2TAC6 998 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PARGQ86W56 976 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PLA2G4DQ86XP0 818 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TMEM25Q86YD3 366 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TRIML2Q8N7C3 387 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 DEFB124Q8NES8 71 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SEMA6DQ8NFY4 1073 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ERMNQ8TAM6 284 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SLC25A36Q96CQ1 311 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ANKRD27Q96NW4 1050 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 NUDT15Q9NV35 164 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MIOXQ9UGB7 285 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 LRP12Q9Y561 859 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 CKAP5Q14008 2032 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TRAV26-1A0A087WT03 109 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 A8MU76 341 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ARPC3O15145 178 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 NVLO15381 856 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 TLX3O43711 291 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 ANP32DO95626 131 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 FGF19O95750 216 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 RPL35AP18077 110 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 GNLYP22749 145 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 CASP1P29466 404 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 GLUD2P49448 558 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 HLCSP50747 726 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 XGP55808 180 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 RPL27P61353 136 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 OC90Q02509 493 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 TFDP1Q14186 410 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TGFBIQ15582 683 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 C6orf183Q5T699 404 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ZNF658Q5TYW1 1059 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 NIPAL3Q6P499 406 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 DOK6Q6PKX4 331 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 NIPA1Q7RTP0 329 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 RD3Q7Z3Z2 195 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 GPR141Q7Z602 305 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 CCDC65Q8IXS2 484 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 NFAM1Q8NET5 270 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR2T33Q8NG76 320 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR2L3Q8NG85 312 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR6S1Q8NH40 331 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 WFIKKN2Q8TEU8 576 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MAIP1Q8WWC4 291 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ELMO1Q92556 727 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 C10orf90Q96M02 699 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PRRC1Q96M27 445 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TAAR1Q96RJ0 339 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SPATA16Q9BXB7 569 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TDRD1Q9BXT4 1180 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 SDCBP2Q9H190 292 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 C10orf88Q9H8K7 445 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MAN2C1Q9NTJ4 1040 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.24□□□□□ -2.05
MCF2-204ENST00000414978 MARCH5Q9NX47 278 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 KLHL28Q9NXS3 571 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 IL20Q9NYY1 176 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 IFNKQ9P0W0 207 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PILRBQ9UKJ0 227 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 LRRK1Q38SD2 2015 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 A0A1B0GUS0 222 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 WDR91A4D1P6 747 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MTMR11A4FU01 709 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 C15orf62A8K5M9 175 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SCO2O43819 266 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR2F2O95006 317 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 RAF1P04049 648 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 HIST1H2AGP0C0S8 130 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 KRT3P12035 628 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 FBLP22087 321 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 PSMB6P28072 239 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 HTR2AP28223 471 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 CEACAM8P31997 349 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 BDH1Q02338 343 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SLAQ13239 276 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 SERTAD2Q14140 314 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 FGD3Q5JSP0 725 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 C10orf25Q5T742 122 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR2A2Q6IF42 318 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PRSS57Q6UWY2 283 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 CBWD2Q8IUF1 395 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 MFSD6LQ8IWD5 586 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 PYROXD2Q8N2H3 581 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR5M9Q8NGP3 310 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 OR1L4Q8NGR5 311 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 WDR36Q8NI36 951 aaKnown RBP2.24□□□□□ -2.05
MCF2-204ENST00000414978 GLYATL2Q8WU03 294 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 HIST1H2ACQ93077 130 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 LHX4Q969G2 390 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 AKR1E2Q96JD6 320 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TTYH2Q9BSA4 534 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 TEKT3Q9BXF9 490 aa2.24□□□□□ -2.05
MCF2-204ENST00000414978 ANGPTL4Q9BY76 406 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms