RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 BCKDHAP12694 445 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF16P17020 682 aaPredicted RBP10.7□□□□□ -0.7
LIMS2-210ENST00000413578 ATP6V1C1P21283 382 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 PTAFRP25105 342 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 CD40P25942 277 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 SLC7A1P30825 629 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 NTF4P34130 210 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 RPL38P63173 70 aaKnown RBP10.7□□□□□ -0.7
LIMS2-210ENST00000413578 SKP2Q13309 424 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 QPRTQ15274 297 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 FBXW9Q5XUX1 488 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF544Q6NX49 715 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 TMEM108Q6UXF1 575 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 TMPPEQ6ZT21 453 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 TRMT10CQ7L0Y3 403 aaKnown RBP10.7□□□□□ -0.7
LIMS2-210ENST00000413578 GALNT5Q7Z7M9 940 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 MUC15Q8N387 334 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 ARIH2OSQ8N7S6 290 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 TOR1AIP2Q8NFQ8 470 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 BEX2Q9BXY8 128 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 ACTRT3Q9BYD9 372 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 TXLNGYQ9BZA5 131 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 MANSC1Q9H8J5 431 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 MALT1Q9UDY8 824 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 KCNE5Q9UJ90 142 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 DNAJC15Q9Y5T4 150 aa10.7□□□□□ -0.7
LIMS2-210ENST00000413578 A0A1W2PPM1 405 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF716A6NP11 495 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 VWC2LB2RUY7 222 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 PDLIM1O00151 329 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 AZIN1O14977 448 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 SCAMP2O15127 329 aaKnown RBP10.69□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF264O43296 627 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 RAD51DO75771 328 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 DHRS4L1P0CG22 281 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 LAMP1P11279 417 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 UBL4AP11441 157 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 IGFBP5P24593 272 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 ASMTP46597 345 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 DIO1P49895 249 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 RAB35Q15286 201 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 CCDC153Q494R4 210 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 TIGD2Q4W5G0 525 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 CFAP157Q5JU67 520 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 KANK2Q63ZY3 851 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 CYB5R2Q6BCY4 276 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 SLC22A25Q6T423 547 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 R3HCC1LQ7Z5L2 792 aaKnown RBP10.69□□□□□ -0.7
LIMS2-210ENST00000413578 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 PIAS4Q8N2W9 510 aaPredicted RBP10.69□□□□□ -0.7
LIMS2-210ENST00000413578 OR56A1Q8NGH5 318 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 ADAMTS15Q8TE58 950 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 ST8SIA1Q92185 356 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 FAM168AQ92567 244 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 PROX1Q92786 737 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 MUS81Q96NY9 551 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 OR5B2Q96R09 309 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 C19orf24Q9BVV8 132 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 AMBRA1Q9C0C7 1298 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 NMUR2Q9GZQ4 415 aa10.69□□□□□ -0.7
LIMS2-210ENST00000413578 QRSL1Q9H0R6 528 aaKnown RBP10.69□□□□□ -0.7
LIMS2-210ENST00000413578 C12orf65Q9H3J6 166 aaKnown RBP10.69□□□□□ -0.7
LIMS2-210ENST00000413578 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.69□□□□□ -0.7
LIMS2-210ENST00000413578 CENPVL1A0A0U1RR11 272 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SERINC4A6NH21 518 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 GTPBP1O00178 669 aaKnown RBP10.68□□□□□ -0.7
LIMS2-210ENST00000413578 LMX1BO60663 402 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 URI1O94763 535 aaPredicted RBP10.68□□□□□ -0.7
LIMS2-210ENST00000413578 ITGA5P08648 1049 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 LINC00032P0C843 101 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 CRHR1P34998 444 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 CCT3P49368 545 aaKnown RBP10.68□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF83P51522 516 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 EFNA4P52798 201 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SLC16A1P53985 500 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 FOXG1P55316 489 aaPredicted RBP10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SESN3P58005 492 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 CBFBQ13951 182 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF141Q15928 474 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 GABRA6Q16445 453 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 UGT3A2Q3SY77 523 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SYT14P1Q58G82 188 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 PDZK1Q5T2W1 519 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 LIPMQ5VYY2 423 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 MTDHQ86UE4 582 aaKnown RBP10.68□□□□□ -0.7
LIMS2-210ENST00000413578 ZNF100Q8IYN0 542 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 FBXL14Q8N1E6 418 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 OR7A2PQ8NGA2 310 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 OR52N5Q8NH56 324 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 OR2W6PQ8NHA6 318 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 OR5P2Q8WZ92 322 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SDF2Q99470 211 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 INPP5KQ9BT40 448 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 LAT2Q9GZY6 243 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SHARPINQ9H0F6 387 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 SERHL2Q9H4I8 314 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 TBK1Q9UHD2 729 aa10.68□□□□□ -0.7
LIMS2-210ENST00000413578 A0A1W2PR80 420 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 SLC35F4A4IF30 521 aa10.67□□□□□ -0.7
LIMS2-210ENST00000413578 IGHV3-9P01782 118 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms