RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 RASD1Q9Y272 281 aa3.69□□□□□ -1.82
HMGB3P31-201ENST00000413333 A0A087WWV3 80 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 LOC100131303A0A0U1RQF7 123 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 VSTM2BA6NLU5 285 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 SNTNA6NMZ2 147 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 FAM220BPB1ANY3 271 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 NBR2O15453 112 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 LATO43561 262 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 PRKYO43930 277 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 ZNF254O75437 659 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 VDAC1P21796 283 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 HOXD10P28358 340 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 CD80P33681 288 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 RPL29P47914 159 aaKnown RBP3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 TDO2P48775 406 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 STARP49675 285 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 PRKXP51817 358 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 SLC25A1P53007 311 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 ATP1B3P54709 279 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 CXCL6P80162 114 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 BST1Q10588 318 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 ASAH1Q13510 395 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 DPYSL2Q16555 572 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 IMMTQ16891 758 aaKnown RBP3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 HIGD2BQ4VC39 106 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 UQCC3Q6UW78 93 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 C2orf66Q6UXQ4 117 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 DHDDSQ86SQ9 333 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 SERINC5Q86VE9 423 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 NECAB1Q8N987 351 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 MAPK1IP1LQ8NDC0 245 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 OR1L4Q8NGR5 311 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 RHOXF1Q8NHV9 184 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 TIMD4Q96H15 378 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 TPD52L3Q96J77 140 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 IL4I1Q96RQ9 567 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 UBXN6Q9BZV1 441 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 NAT10Q9H0A0 1025 aaKnown RBP3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 ZNF385DQ9H6B1 395 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 TM9SF3Q9HD45 589 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 WARS2Q9UGM6 360 aaKnown RBP3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 ANGPTL2Q9UKU9 493 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 PRPF19Q9UMS4 504 aaKnown RBP3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 HCFC1P51610 2035 aa3.68□□□□□ -1.82
HMGB3P31-201ENST00000413333 FRMPD3Q5JV73 1810 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 KANK1Q14678 1352 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 FAM240BA0A1B0GVZ2 78 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CTAGE15A4D2H0 777 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 DHRS7CA6NNS2 312 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 B4DXG7 233 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 E7ESA3 106 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 F5H6K3 240 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 OR10H3O60404 316 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 ZNF354AO60765 605 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CIB2O75838 187 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 AP2A1O95782 977 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 TSPAN12O95859 305 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 UQCRFS1P1P0C7P4 283 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 TOP1P11387 765 aaKnown RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 MX1P20591 662 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 ANXA13P27216 316 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 GNA11P29992 359 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 YWHABP31946 246 aaKnown RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 GCKP35557 465 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 LEPP41159 167 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 VEGFCP49767 419 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 HLCSP50747 726 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 DAP3P51398 398 aaKnown RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 EFNA3P52797 238 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 ATP5IP56385 69 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 RPL23AP62750 156 aaKnown RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 KLRC3Q07444 240 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CFAP221Q4G0U5 840 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 PAN3Q58A45 887 aaKnown RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 SLC22A10Q63ZE4 541 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 OR5M10Q6IEU7 315 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 OR2A2Q6IF42 318 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CCDC137Q6PK04 289 aaKnown RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CTAGE6Q86UF2 777 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 GPR65Q8IYL9 337 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 ZNF485Q8NCK3 441 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 TCTEX1D2Q8WW35 142 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 RAPGEF5Q92565 580 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 EFHD2Q96C19 240 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CLCC1Q96S66 551 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 SLC35A5Q9BS91 424 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 DPH7Q9BTV6 452 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CHIAQ9BZP6 476 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 PKIBQ9C010 78 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 VCPKMTQ9H867 229 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CTNNA3Q9UI47 895 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 CLSPNQ9HAW4 1339 aa3.67□□□□□ -1.82
HMGB3P31-201ENST00000413333 A0A1B0GU03 582 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 SMIM28A0A1B0GU29 152 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 OR52A4PA6NMU1 304 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 ZNF264O43296 627 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 MED7O43513 233 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 CXCL13O43927 109 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 HCN1O60741 890 aa3.66□□□□□ -1.82
HMGB3P31-201ENST00000413333 PFKFB2O60825 505 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms