RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SLC1A6P48664 564 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 PTH2RP49190 550 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 KHKP50053 298 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 HPCAP84074 193 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 TIGD2Q4W5G0 525 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 SFRP5Q5T4F7 317 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 HEPHL1Q6MZM0 1159 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 NUFIP2Q7Z417 695 aaKnown RBP13.11□□□□□ -0.31
CBX3-203ENST00000409747 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 OR5B2Q96R09 309 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 THUMPD3Q9BV44 507 aaKnown RBP13.11□□□□□ -0.31
CBX3-203ENST00000409747 ESRP2Q9H6T0 727 aaKnown RBP13.11□□□□□ -0.31
CBX3-203ENST00000409747 HAO1Q9UJM8 370 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 MKLN1Q9UL63 735 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 WDR45Q9Y484 360 aa13.11□□□□□ -0.31
CBX3-203ENST00000409747 NSD1Q96L73 2696 aaPredicted RBP13.11□□□□□ -0.31
CBX3-203ENST00000409747 ESPNB1AK53 854 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 FCMRO60667 390 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 UBTFL6P0CB48 400 aaPredicted RBP13.1□□□□□ -0.31
CBX3-203ENST00000409747 DHRS4L1P0CG22 281 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 LBPP18428 481 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CSNK2A1P68400 391 aaPredicted RBP13.1□□□□□ -0.31
CBX3-203ENST00000409747 ITGADQ13349 1161 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 SSX8Q7RTT4 187 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CROCCP2Q86T23 111 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CLEC4FQ8N1N0 589 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 PSD2Q9BQI7 771 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 RNF115Q9Y4L5 304 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 ARID1AO14497 2285 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 A0A1W2PNR3 127 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 H7C1Q1 480 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 ANKRD28O15084 1053 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CYTIPO60759 359 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CPSF4O95639 269 aaKnown RBP13.1□□□□□ -0.31
CBX3-203ENST00000409747 OR12D1P0DN82 309 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CHI3L1P36222 383 aaPredicted RBP13.1□□□□□ -0.31
CBX3-203ENST00000409747 SESN3P58005 492 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 RASGEF1BQ0VAM2 473 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 MERTKQ12866 999 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 SAXO2Q658L1 398 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 ALKBH2Q6NS38 261 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 ADAM5Q6NVV9 412 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 Q6ZT83 130 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 ANKRD46Q86W74 232 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 XAGE5Q8WWM1 108 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 IGFBPL1Q8WX77 278 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
CBX3-203ENST00000409747 NEURL3Q96EH8 262 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 SORT1Q99523 831 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 CENPHQ9H3R5 247 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 ACER3Q9NUN7 267 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 EMC3Q9P0I2 261 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 KCNE5Q9UJ90 142 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 HEATR5AQ86XA9 2040 aa13.1□□□□□ -0.31
CBX3-203ENST00000409747 IGHV3-15A0A0B4J1V0 119 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 ZNF724A8MTY0 619 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 E9PBE3 544 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 SCN2BO60939 215 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 H6PDO95479 791 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 ADAP00813 363 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 CD3EP07766 207 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 FKBP2P26885 142 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 APOBEC1P41238 236 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 OR3A2P47893 321 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 DIO1P49895 249 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 ANXA11P50995 505 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 TXNL4AP83876 142 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 LRRC74AQ0VAA2 488 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 STX3Q13277 289 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 CAPRIN1Q14444 709 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 CASP8Q14790 479 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 TAB1Q15750 504 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 SYT14P1Q58G82 188 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 TYW3Q6IPR3 259 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 TNFAIP8L2Q6P589 184 aaPredicted RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 ZNF619Q8N2I2 560 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 TRIML2Q8N7C3 387 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 FAM71CQ8NEG0 241 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 ZNF563Q8TA94 476 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 ROPN1LQ96C74 230 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 ZHX1-C8orf76Q96EF9 292 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 SLC35A5Q9BS91 424 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 NUF2Q9BZD4 464 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 C20orf27Q9GZN8 174 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 SAP130Q9H0E3 1048 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 QRSL1Q9H0R6 528 aaKnown RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 MEAF6Q9HAF1 191 aa13.09□□□□□ -0.31
CBX3-203ENST00000409747 ZNF701Q9NV72 531 aaPredicted RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 MARCOQ9UEW3 520 aaPredicted RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.09□□□□□ -0.31
CBX3-203ENST00000409747 V9GYY5 206 aaPredicted RBP13.09□□□□□ -0.31
CBX3-203ENST00000409747 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 SULT2B1O00204 365 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 SMAD9O15198 467 aaKnown RBP13.08□□□□□ -0.32
CBX3-203ENST00000409747 PLAUP00749 431 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 BGNP21810 368 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 S100A3P33764 101 aa13.08□□□□□ -0.32
CBX3-203ENST00000409747 PGM1P36871 562 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms