RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 CCNYL1Q8N7R7 359 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 ZNF614Q8N883 585 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 OR4C3Q8NH37 302 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 FBXO27Q8NI29 283 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 FAM110BQ8TC76 370 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 ADAMTS15Q8TE58 950 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 TMEM234Q8WY98 164 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 APH1AQ96BI3 265 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 MRGPRX4Q96LA9 322 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 BTBD2Q9BX70 525 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 RTN4RQ9BZR6 473 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 CHODLQ9H9P2 273 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 BCO1Q9HAY6 547 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 NINJ2Q9NZG7 142 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 SH3BP4Q9P0V3 963 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 FBXO9Q9UK97 447 aaPredicted RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 FAF1Q9UNN5 650 aaPredicted RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 POLR3HQ9Y535 204 aaPredicted RBP6.85□□□□□ -1.31
LSM5-202ENST00000409292 TIMM22Q9Y584 194 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 ACTL7BQ9Y614 415 aa6.85□□□□□ -1.31
LSM5-202ENST00000409292 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.84□□□□□ -1.31
LSM5-202ENST00000409292 EXOC1LA0A1B0GW35 172 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZNF724A8MTY0 619 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 SHISA9B4DS77 424 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 M0R1B8 84 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 SLC28A1O00337 649 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 TCF21O43680 179 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 RAMP1O60894 148 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 KCNK2O95069 426 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 CD8AP01732 235 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 PGRP06401 933 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 LINGO3P0C6S8 592 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZNF16P17020 682 aaPredicted RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 PAX7P23759 505 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 PSMA4P25789 261 aaKnown RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 FKBP2P26885 142 aaKnown RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 HPCAL1P37235 193 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ASMTP46597 345 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZNF83P51522 516 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 CCR4P51679 360 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 PRKAA2P54646 552 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 SNRPD2P62316 118 aaKnown RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 CBFBQ13951 182 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 GGTLC2Q14390 218 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 CARTPTQ16568 116 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 C3orf33Q6P1S2 294 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 BHLHB9Q6PI77 547 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZDHHC24Q6UX98 284 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 LRIG3Q6UXM1 1119 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 C12orf54Q6X4T0 127 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZNF551Q7Z340 670 aaPredicted RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 RFLNBQ8N5W9 214 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 NATD1Q8N6N6 113 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 RFWD2Q8NHY2 731 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZNF764Q96H86 408 aaPredicted RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 TMEM237Q96Q45 408 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 OR5B2Q96R09 309 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 STACQ99469 402 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 INPP5KQ9BT40 448 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 RASSF4Q9H2L5 321 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 C12orf65Q9H3J6 166 aaKnown RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 REEP4Q9H6H4 257 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 MANSC1Q9H8J5 431 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 DUSP22Q9NRW4 184 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ACSS1Q9NUB1 689 aaPredicted RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 ZCCHC3Q9NUD5 404 aaKnown RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 PARPBPQ9NWS1 579 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 ASB6Q9NWX5 421 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 TAS2R16Q9NYV7 291 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 NTMQ9P121 344 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 NOSIPQ9Y314 301 aaKnown RBP6.84□□□□□ -1.31
LSM5-202ENST00000409292 CR1P17927 2039 aa6.84□□□□□ -1.31
LSM5-202ENST00000409292 NBEAL1Q6ZS30 2694 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 CADP27708 2225 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 TMEM114B3SHH9 223 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 SULT2B1O00204 365 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 ANKRD28O15084 1053 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 ZNF264O43296 627 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 EIF4E2O60573 245 aaKnown RBP6.83□□□□□ -1.32
LSM5-202ENST00000409292 CYTIPO60759 359 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 MRPL33O75394 65 aaKnown RBP6.83□□□□□ -1.32
LSM5-202ENST00000409292 RAD51DO75771 328 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 SNUPNO95149 360 aaKnown RBP6.83□□□□□ -1.32
LSM5-202ENST00000409292 PGM3O95394 542 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 WNT11O96014 354 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 IGKV1D-16P01601 117 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 IGHV4-31P0DP07 118 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 TFPIP10646 304 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 UROSP10746 265 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 MYL2P10916 166 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 NEFHP12036 1026 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 FSTP19883 344 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 COX5AP20674 150 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 PTNP21246 168 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 CD40P25942 277 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 MAPK1P28482 360 aa6.83□□□□□ -1.32
LSM5-202ENST00000409292 APOBEC3AP31941 199 aaPredicted RBP6.83□□□□□ -1.32
LSM5-202ENST00000409292 HTR6P50406 440 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms