RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 TMEM185BQ9H7F4 350 aa12.05□□□□□ -0.48
PTPRN-202ENST00000409251 NUBP2Q9Y5Y2 271 aa12.05□□□□□ -0.48
PTPRN-202ENST00000409251 TDRD6O60522 2096 aaKnown RBP12.05□□□□□ -0.48
PTPRN-202ENST00000409251 A0A1W2PQU0 124 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 GOSR2O14653 212 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 KLF8O95600 359 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 HOXB9P17482 250 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 FCARP24071 287 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ACADLP28330 430 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 OR12D2P58182 307 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 PLA1AQ53H76 456 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 VRK2Q86Y07 508 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 LINC00518Q8N0U6 118 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 LILRB1Q8NHL6 650 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ZDHHC1Q8WTX9 485 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 TFGQ92734 400 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 TIFAQ96CG3 184 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 FBXO17Q96EF6 278 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 C4orf36Q96KX1 117 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 OR2M2Q96R28 347 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ARHGAP9Q9BRR9 750 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 EXOSC1Q9Y3B2 195 aaKnown RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 A0A087WUU8 490 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 CARNS1A5YM72 827 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 STK25O00506 426 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 RGS9O75916 674 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 PIPP12273 146 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 CXCL2P19875 107 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 F8A1P23610 371 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 SORDQ00796 357 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 SWI5Q1ZZU3 235 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 YOD1Q5VVQ6 348 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 LIPJQ5W064 366 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ADGRG3Q86Y34 549 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 NKAIN4Q8IVV8 208 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 SFTPA2Q8IWL1 248 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ARL14Q8N4G2 192 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 C17orf47Q8NEP4 570 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 TMEM185AQ8NFB2 350 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 IFT27Q9BW83 186 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 DPH1Q9BZG8 443 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ZNF304Q9HCX3 659 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 MARK1Q9P0L2 795 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 MYEF2Q9P2K5 600 aaKnown RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ECDO95905 644 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ADRB1P08588 477 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 FBXO45P0C2W1 286 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 C4BPBP20851 252 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 DRD3P35462 400 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 MAPK9P45984 424 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 NCBP2P52298 156 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 TNFRSF17Q02223 184 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 RAB40BQ12829 278 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ETFDHQ16134 617 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 GSG1Q2KHT4 349 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ACSM3Q53FZ2 586 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 AMZ2Q86W34 360 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 ACBD7Q8N6N7 88 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 NANPQ8TBE9 248 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 TSACCQ96A04 125 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 C16orf58Q96GQ5 468 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 SLC35G5Q96KT7 338 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 BTBD1Q9H0C5 482 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 CUEDC1Q9NWM3 386 aaPredicted RBP12.04□□□□□ -0.48
PTPRN-202ENST00000409251 NTMQ9P121 344 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 FBXL4Q9UKA2 621 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 DOCK8Q8NF50 2099 aa12.04□□□□□ -0.48
PTPRN-202ENST00000409251 A0A1B0GVT2 93 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 TRDV1A0A1B0GX56 115 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ACOD1A6NK06 481 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 C5orf67F2Z3F1 127 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 RNF13O43567 381 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 KCNJ13O60928 360 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SDC3O75056 442 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ZNF35P13682 527 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 TPBGQ13641 420 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ITPRIPL2Q3MIP1 535 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ZNF311Q5JNZ3 666 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 CD276Q5ZPR3 534 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 GPAT4Q86UL3 456 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 CBLN2Q8IUK8 224 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SLITRK4Q8IW52 837 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 OR5W2Q8NH69 310 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 CCL4L1Q8NHW4 92 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 WDR20Q8TBZ3 569 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 LGALS14Q8TCE9 139 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 RFKQ969G6 155 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 PDCD1LG2Q9BQ51 273 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ZNF471Q9BX82 626 aaPredicted RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 POLDIP3Q9BY77 421 aaKnown RBP12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SLC22A11Q9NSA0 550 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 ACSL5Q9ULC5 683 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 KCNMB2Q9Y691 235 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SCN8AQ9UQD0 1980 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 POM121BA6NF01 834 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 OR2W5A6NFC9 320 aa12.03□□□□□ -0.48
PTPRN-202ENST00000409251 SGCEO43556 437 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms