RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 VBP1P61758 197 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 PSPHP78330 225 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 AADACL4Q5VUY2 407 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 APOOLQ6UXV4 268 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 OAFQ86UD1 273 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 TMCO5AQ8N6Q1 288 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 C3orf49Q96BT1 292 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 LGALS12Q96DT0 336 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 OMA1Q96E52 524 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 CCNL2Q96S94 520 aaPredicted RBP17.39■□□□□ 0.37
USP39-202ENST00000409025 IFT27Q9BW83 186 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 RACGAP1Q9H0H5 632 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 H2AFY2Q9P0M6 372 aaPredicted RBP17.39■□□□□ 0.37
USP39-202ENST00000409025 CARD8Q9Y2G2 431 aa17.39■□□□□ 0.37
USP39-202ENST00000409025 VSTM2BA6NLU5 285 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 GNB5O14775 395 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 AIREO43918 545 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 RGS6P49758 472 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 PNLIPRP2P54317 469 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 NXNL2Q5VZ03 156 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 LNX2Q8N448 690 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 NANOGP1Q8N7R0 232 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 AGBL5Q8NDL9 886 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 PROKR2Q8NFJ6 384 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 OR51A7Q8NH64 312 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 CTRCQ99895 268 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 ENKD1Q9H0I2 346 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 ARRDC1-AS1Q9H2J1 176 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 FGF20Q9NP95 211 aaPredicted RBP17.38■□□□□ 0.37
USP39-202ENST00000409025 CLEC2DQ9UHP7 191 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 ICAM5Q9UMF0 924 aa17.38■□□□□ 0.37
USP39-202ENST00000409025 TRAV27A0A087WT01 109 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 FAM86C2PA6NEL3 165 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 SAGE2PA6NJ88 616 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 MYL12BO14950 172 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 OIP5O43482 229 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 CPNE3O75131 537 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 PPM1BO75688 479 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 SLC2A10O95528 541 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 LDOC1O95751 146 aaPredicted RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 CDK4P11802 303 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 ABCD3P28288 659 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 GRK6P43250 576 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 CLK1P49759 484 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 RNF4P78317 190 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 SLC43A2Q8N370 569 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 NDNFQ8TB73 568 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 RPL3LQ92901 407 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 SGTBQ96EQ0 304 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 LAT2Q9GZY6 243 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 FN3KQ9H479 309 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 CHCHD3Q9NX63 227 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 BAIAP2Q9UQB8 552 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 LSM2Q9Y333 95 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 ZDBF2Q9HCK1 2354 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 A0A1W2PQD3 144 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 MEN1O00255 615 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 KHNYNO15037 678 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 CSO75390 466 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 ZNF883P0CG24 379 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 PNMTP11086 282 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 MYL12AP19105 171 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 GADD45AP24522 165 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 GAS1P54826 345 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 NCS1P62166 190 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 ZFP36L1Q07352 338 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 C1DQ13901 141 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 ANGPT1Q15389 498 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 SPHARQ15513 63 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 C3orf38Q5JPI3 329 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 DESI1Q6ICB0 168 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 CBLN3Q6UW01 205 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 THSD4Q6ZMP0 1018 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 RTL4Q6ZR62 310 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 CXXC5Q7LFL8 322 aaKnown RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 NFAM1Q8NET5 270 aaPredicted RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 TBC1D15Q8TC07 691 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 ATOH1Q92858 354 aaPredicted RBP17.37■□□□□ 0.37
USP39-202ENST00000409025 TP53INP1Q96A56 240 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 TNFRSF13CQ96RJ3 184 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 SEMA4CQ9C0C4 833 aa17.37■□□□□ 0.37
USP39-202ENST00000409025 ASCC3Q8N3C0 2202 aaKnown RBP17.36■□□□□ 0.37
USP39-202ENST00000409025 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.36■□□□□ 0.37
USP39-202ENST00000409025 ELOA3DA6NLF2 546 aaPredicted RBP17.36■□□□□ 0.37
USP39-202ENST00000409025 ENDOUP21128 410 aaKnown RBP17.36■□□□□ 0.37
USP39-202ENST00000409025 SLC6A6P31641 620 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 SLC6A8P48029 635 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 NRG3P56975 720 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 TSTQ16762 297 aaKnown RBP17.36■□□□□ 0.37
USP39-202ENST00000409025 ELOA3BQ3SY89 546 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 CPOQ8IVL8 374 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 ELOA3Q8NG57 546 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 TBL1XR1Q9BZK7 514 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 SLC19A3Q9BZV2 496 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 SLC26A1Q9H2B4 701 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 HINT3Q9NQE9 182 aaKnown RBP17.36■□□□□ 0.37
USP39-202ENST00000409025 HEATR5AQ86XA9 2040 aa17.36■□□□□ 0.37
USP39-202ENST00000409025 ALG1L2C9J202 215 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 CCRL2O00421 344 aa17.35■□□□□ 0.37
USP39-202ENST00000409025 NDUFB5O43674 189 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms