RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 ZNF474Q6S9Z5 364 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 CD164L2Q6UWJ8 174 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 KIRREL2Q6UWL6 708 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 DHRS13Q6UX07 377 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 C4orf22Q6V702 233 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 Q6ZPB1 254 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 RFLNAQ6ZTI6 216 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 IL17RELQ6ZVW7 336 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 TMPRSS11FQ6ZWK6 438 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 TUBA1AQ71U36 451 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 TRMT10CQ7L0Y3 403 aaKnown RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 NDUFAF7Q7L592 441 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 FJX1Q86VR8 437 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 C17orf82Q86X59 251 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 RBFAQ8N0V3 343 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 TRAM1L1Q8N609 369 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 GPR26Q8NDV2 337 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 FAM76AQ8TAV0 307 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 NEU4Q8WWR8 484 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 PHYHIPQ92561 330 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 PROX1Q92786 737 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLCO2A1Q92959 643 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 TSACCQ96A04 125 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 RNF183Q96D59 192 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 PDXPQ96GD0 296 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 COQ2Q96H96 371 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 ELMO2Q96JJ3 720 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 PBKQ96KB5 322 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF570Q96NI8 536 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 RIOK2Q9BVS4 552 aaKnown RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 FSD1LQ9BXM9 530 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 MFFQ9GZY8 342 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 TCEAL2Q9H3H9 227 aaPredicted RBP4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 FGF22Q9HCT0 170 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 FAM53CQ9NYF3 392 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 IL17CQ9P0M4 197 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 PIGLQ9Y2B2 252 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 NEUROG3Q9Y4Z2 214 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 LRP12Q9Y561 859 aa4.89□□□□□ -1.63
HMGB3P7-201ENST00000400214 SPTBP11277 2137 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GAPDHSO14556 408 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CHUKO15111 745 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC16A5O15375 505 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 OR1F1O43749 312 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 DUX1O43812 170 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 NDUFS6O75380 124 aaKnown RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 IGHV2-70P01814 119 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 FGGP02679 453 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 LYNP07948 512 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ACAA1P09110 424 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PIRTP0C851 137 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ITGAMP11215 1152 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CPN1P15169 458 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 NCK1P16333 377 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF10P21506 573 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ETV5P41161 510 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 DUSP3P51452 185 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF140P52738 457 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 RAB11AP62491 216 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 IRF8Q02556 426 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 NHLH2Q02577 135 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PEX6Q13608 980 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 KEAP1Q14145 624 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 TAF1AQ15573 450 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 RAB11BQ15907 218 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZNF124Q15973 351 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ZSCAN26Q16670 478 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 RNF151Q2KHN1 245 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PYCR3Q53H96 274 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PRR31Q5SQ13 230 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GRTP1Q5TC63 336 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 NKAIN2Q5VXU1 208 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCDC137Q6PK04 289 aaKnown RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCNI2Q6ZMN8 369 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 COLCA1Q6ZS62 124 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GLT6D1Q7Z4J2 308 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GKN2Q86XP6 184 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CROCCP3Q8IVE0 287 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 FOXRED2Q8IWF2 684 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 CCDC36Q8IYA8 594 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 SLC35F6Q8N357 371 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 D2HGDHQ8N465 521 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 LINC00482Q8N8I6 264 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PRELID2Q8N945 189 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 LINC01356Q8N9X3 169 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 LRRC20Q8TCA0 184 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 ACTRT1Q8TDG2 376 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 LMX1AQ8TE12 382 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GIPC3Q8TF64 312 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 UBTD2Q8WUN7 234 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 C1orf54Q8WWF1 131 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 PIGCQ92535 297 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 RPL3LQ92901 407 aaKnown RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GLYATL1Q969I3 302 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 SENP5Q96HI0 755 aaPredicted RBP4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 GPR137Q96N19 417 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 TECTBQ96PL2 329 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 DUX5Q96PT3 197 aa4.88□□□□□ -1.63
HMGB3P7-201ENST00000400214 TBL1YQ9BQ87 522 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms