RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 ANKRD10Q9NXR5 420 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 FBXL2Q9UKC9 423 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 A0A0B4J2E0 115 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 LOC100653049A0A140TA62 436 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 A0A1B0GX12 115 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 OR2M5A3KFT3 312 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 NPIPB13A6NJU9 1138 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 NPIPB4C9JG80 1138 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 CHP2O43745 196 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 SCO2O43819 266 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 KRT34O76011 436 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 NUDT7P0C024 238 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 TSPAN19P0C672 248 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 GP1BBP13224 206 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 BMP7P18075 431 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 AGFG1P52594 562 aaKnown RBP6.8□□□□□ -1.32
USP16-204ENST00000399976 GTF2A1P52655 376 aaPredicted RBP6.8□□□□□ -1.32
USP16-204ENST00000399976 SLC16A1P53985 500 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 SESN3P58005 492 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 QPRTQ15274 297 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 POU4F3Q15319 338 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 ATG4DQ86TL0 474 aaPredicted RBP6.8□□□□□ -1.32
USP16-204ENST00000399976 LINC00471Q8N535 108 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 POU5F2Q8N7G0 328 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 DOK4Q8TEW6 326 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 ASB5Q8WWX0 329 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 CPNE4Q96A23 557 aaPredicted RBP6.8□□□□□ -1.32
USP16-204ENST00000399976 TAMM41Q96BW9 452 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 SLC47A1Q96FL8 570 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 TIMP4Q99727 224 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 PIGMQ9H3S5 423 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 SPRR3Q9UBC9 169 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 FOXD3Q9UJU5 478 aaPredicted RBP6.8□□□□□ -1.32
USP16-204ENST00000399976 SLC5A6Q9Y289 635 aa6.8□□□□□ -1.32
USP16-204ENST00000399976 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 HSPB2A8KAH6 182 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 CENPBD1B2RD01 187 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 SEC14L5O43304 696 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 SLC19A2O60779 497 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 ITGA2P17301 1181 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 ME2P23368 584 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 CSNK2A1P68400 391 aaPredicted RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 CAPRIN1Q14444 709 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 HSPB2Q16082 182 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 CTU2Q2VPK5 515 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 ASRGL1Q7L266 308 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 ULK2Q8IYT8 1036 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 RNF113BQ8IZP6 322 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 OFCC1Q8IZS5 231 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 SCAIQ8N9R8 606 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 RBM15BQ8NDT2 890 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 OR14L1PQ8NHC6 308 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 PNPT1Q8TCS8 783 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 SLC7A6OSQ96CW6 309 aaPredicted RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 DDIT4LQ96D03 193 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 USB1Q9BQ65 265 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 TAS2R1Q9NYW7 299 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 MEMO1Q9Y316 297 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 KLF2Q9Y5W3 355 aaPredicted RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 ARRDC5A6NEK1 342 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 B2RBV5 119 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 GNB5O14775 395 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 EIF1BO60739 113 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 GMNNO75496 209 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 MT-ATP6P00846 226 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 FESP07332 822 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 SMIM11AP58511 58 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 TRIM25Q14258 630 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 RNPS1Q15287 305 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 ACSF3Q4G176 576 aaPredicted RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 CYBRD1Q53TN4 286 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 BICRALQ6AI39 1079 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 GTF2IRD2BQ6EKJ0 949 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 XKRXQ6PP77 449 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 GTF2IRD2Q86UP8 949 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 PAPD5Q8NDF8 572 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 GPR32P1Q8NGA4 272 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 CNOT9Q92600 299 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 PROX1Q92786 737 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 PRRC1Q96M27 445 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 KLHL15Q96M94 604 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 GNRHR2Q96P88 292 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 MYCBPQ99417 103 aaPredicted RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 SF3B5Q9BWJ5 86 aaKnown RBP6.79□□□□□ -1.32
USP16-204ENST00000399976 SLC24A3Q9HC58 644 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 CHRNA9Q9UGM1 479 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 CARD8Q9Y2G2 431 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 FREM2Q5SZK8 3169 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 PCNX3Q9H6A9 2034 aa6.79□□□□□ -1.32
USP16-204ENST00000399976 A0A087WUJ7 227 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 ZNF724A8MTY0 619 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 OR2T1O43869 369 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 DNAJC8O75937 253 aaPredicted RBP6.78□□□□□ -1.32
USP16-204ENST00000399976 UBOX5O94941 541 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 VAMP5O95183 116 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 RCBTB2O95199 551 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 LYPD3O95274 346 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 ACVR2AP27037 513 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 RAC3P60763 192 aa6.78□□□□□ -1.32
USP16-204ENST00000399976 GPR85P60893 370 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms