RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 DUSP19Q8WTR2 217 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF578Q96N58 590 aaPredicted RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 LMF2Q9BU23 707 aaKnown RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 RPRD1BQ9NQG5 326 aaKnown RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 POLE4Q9NR33 117 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 RXFP3Q9NSD7 469 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 TAS2R10Q9NYW0 307 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 PCOLCE2Q9UKZ9 415 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 IGHV5-51A0A0C4DH38 117 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 PSMD9O00233 223 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 SLC2A2P11168 524 aaPredicted RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 FPR3P25089 353 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 DUSP8Q13202 625 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 NKAIN1Q4KMZ8 207 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 RPTNQ6XPR3 784 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 GPER1Q99527 375 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 UBQLN3Q9H347 655 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 GPN2Q9H9Y4 310 aaPredicted RBP13□□□□□ -0.33
SCAF4-202ENST00000399804 UCKL1Q9NWZ5 548 aa13□□□□□ -0.33
SCAF4-202ENST00000399804 A0A087WV62 115 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 IGKV1-8A0A0C4DH67 115 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 UTS2O95399 124 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 THBS1P07996 1170 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 PEBP1P30086 187 aaKnown RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 CASRP41180 1078 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 RPS15P62841 145 aaKnown RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 POU4F2Q12837 409 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 GAS6Q14393 721 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 C11orf88Q6PI97 169 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 USP51Q70EK9 711 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 SPRYD4Q8WW59 207 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 DKKL1Q9UK85 242 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 EXO1Q9UQ84 846 aaKnown RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 CMAHPQ9Y471 501 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 SPTBN2O15020 2390 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 PDCD5O14737 125 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 JUNBP17275 347 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF45Q02386 682 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ASB18Q6ZVZ8 466 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ANKRD19PQ9H560 264 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 FAIMQ9NVQ4 179 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 C14orf119Q9NWQ9 140 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF639Q9UID6 485 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 COLQQ9Y215 455 aaPredicted RBP12.99□□□□□ -0.33
SCAF4-202ENST00000399804 OPN1LWP04000 364 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 F13BP05160 661 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 OR2B6P58173 313 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 PPP3R1P63098 170 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 CEP78Q5JTW2 689 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ORAI3Q9BRQ5 295 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 PCED1AQ9H1Q7 454 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 CLEC2DQ9UHP7 191 aa12.99□□□□□ -0.33
SCAF4-202ENST00000399804 ZAR1LA6NP61 321 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 FLRT2O43155 660 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ZFAND5O76080 213 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 PRSS23O95084 383 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 TACR3P29371 465 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 LIPAP38571 399 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 EEF1A2Q05639 463 aaKnown RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ELAVL1Q15717 326 aaKnown RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 TP53I3Q53FA7 332 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SYT6Q5T7P8 510 aaPredicted RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 RAET1LQ5VY80 246 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 MEPCEQ7L2J0 689 aaKnown RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SNX29P2Q8IUI4 249 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SMURF1Q9HCE7 757 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 HHATLQ9HCP6 504 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 POLE3Q9NRF9 147 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SLC39A1Q9NY26 324 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 KLHL21Q9UJP4 597 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ARHGAP33O14559 1287 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 GZMMP51124 257 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 PCBP3P57721 371 aaKnown RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SMAD2Q15796 467 aaKnown RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 GXYLT1Q4G148 440 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 MRM1Q6IN84 353 aaKnown RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 C1orf216Q8TAB5 229 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 MSLNLQ96KJ4 702 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 TTYH2Q9BSA4 534 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 PLEKHA1Q9HB21 404 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 H0YIG0 161 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 CCNKO75909 580 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 CRMP1Q14194 572 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 GDPGP1Q6ZNW5 385 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ALPK2Q86TB3 2170 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 DTX3Q8N9I9 347 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 MAFAQ8NHW3 353 aaPredicted RBP12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ASB15Q8WXK1 588 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 OR1F2PQ96R84 312 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ZNF337Q9Y3M9 751 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SOCS6O14544 535 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 TSC22D2O75157 780 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 BCKDHBP21953 392 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 SFTPDP35247 375 aa12.98□□□□□ -0.33
SCAF4-202ENST00000399804 ADPRMQ3LIE5 342 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms