RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CENPVL1A0A0U1RR11 272 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 C17orf113A0A1B0GUU1 675 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 TCRBV16S1A1N1A0A5B0 115 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 LRIT2A6NDA9 550 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 ERI3O43414 337 aaKnown RBP12.96□□□□□ -0.33
APOB-202ENST00000399256 OR5F1O95221 314 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 AIFM1O95831 613 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 PRKACAP17612 351 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 PSMB1P20618 241 aaKnown RBP12.96□□□□□ -0.33
APOB-202ENST00000399256 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 SERPINA12Q8IW75 414 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 CMTM4Q8IZR5 234 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 SMPDL3BQ92485 455 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 DERL3Q96Q80 235 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 SIDT1Q9NXL6 827 aaKnown RBP12.96□□□□□ -0.33
APOB-202ENST00000399256 PIPOXQ9P0Z9 390 aa12.96□□□□□ -0.33
APOB-202ENST00000399256 EMC8O43402 210 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 TGM6O95932 706 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 SBK2P0C263 348 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 SAGP10523 405 aaPredicted RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 C6P13671 934 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 BMP7P18075 431 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 PRKAR1BP31321 381 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 CCR2P41597 374 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 NRG3P56975 720 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 HTR4Q13639 388 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 DMKNQ6E0U4 476 aaPredicted RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 OR5M10Q6IEU7 315 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 RGS7BPQ6MZT1 257 aaPredicted RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 WDR88Q6ZMY6 472 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 OR52H1Q8NGJ2 320 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 BRIX1Q8TDN6 353 aaKnown RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 LINC00615Q96LM1 132 aaPredicted RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 CD180Q99467 661 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 SHARPINQ9H0F6 387 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 XKR8Q9H6D3 395 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 CCDC86Q9H6F5 360 aaKnown RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 ADGRL4Q9HBW9 690 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 HCFC1R1Q9NWW0 138 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 ABRACLQ9P1F3 81 aa12.96□□□□□ -0.34
APOB-202ENST00000399256 ZNF443Q9Y2A4 671 aaPredicted RBP12.96□□□□□ -0.34
APOB-202ENST00000399256 PLSCR5A0PG75 271 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 SLC22A23A1A5C7 686 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 TUBAL3A6NHL2 446 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 GSTZ1O43708 216 aaPredicted RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 LPLP06858 475 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 CD53P19397 219 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ATP5A1P25705 553 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 ITGB8P26012 769 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 TAS2R43P59537 309 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 MAPK14Q16539 360 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 METTL11BQ5VVY1 283 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 NHLRC1Q6VVB1 395 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 LINC01555Q8NAE3 123 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 OR13C2Q8NGS9 318 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 OR52I2Q8NH67 350 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 SLC35A4Q96G79 324 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 HS6ST2Q96MM7 605 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 TMEM106CQ9BVX2 250 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 LTBP2Q14767 1821 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 PCP4L1A6NKN8 68 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 SLC22A31A6NKX4 558 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 IFNA16P05015 189 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 NMBP08949 121 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 PTHLHP12272 177 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ANXA7P20073 488 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 FOXK2Q01167 660 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ZNF273Q14593 569 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 PUS10Q3MIT2 529 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 HES5Q5TA89 166 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 APOOLQ6UXV4 268 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ZNF836Q6ZNA1 936 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 AMZ2Q86W34 360 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 STPG2Q8N412 459 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 ARL14Q8N4G2 192 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 OR5K2Q8NHB8 316 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 CNOT9Q92600 299 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 CDS1Q92903 461 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 OR14A2Q96R54 314 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 FN3KQ9H479 309 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 KRCC1Q9NPI7 259 aaPredicted RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 NPDC1Q9NQX5 325 aaPredicted RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 SPHK2Q9NRA0 654 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 NUMA1Q14980 2115 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 FAM86C2PA6NEL3 165 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 TGM5O43548 720 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 KHDRBS3O75525 346 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 ERGP11308 486 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 CSNK2A2P19784 350 aaPredicted RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 CERS1P27544 350 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 EPHA4P54764 986 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 PSMA6P60900 246 aaKnown RBP12.95□□□□□ -0.34
APOB-202ENST00000399256 CNKSR3Q6P9H4 555 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 FRRS1Q6ZNA5 592 aa12.95□□□□□ -0.34
APOB-202ENST00000399256 MEIOBQ8N635 442 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms