RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 A0A0A6YYJ9 748 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 LRRC72A6NJI9 287 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 RIIAD1A6NNX1 92 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 TNFRSF4P43489 277 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 OR12D2P58182 307 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 PLAURQ03405 335 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 SLC25A35Q3KQZ1 300 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 CDRT4Q8N9R6 151 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 SNAPC3Q92966 411 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 ERVMER34-1Q9H9K5 563 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 PRDM9Q9NQV7 894 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 NCKAP1Q9Y2A7 1128 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 ATG2BQ96BY7 2078 aa23.64■■□□□ 1.38
COL13A1-203ENST00000398969 NOTOA8MTQ0 251 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 LDB3O75112 727 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 ACVR1BP36896 505 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 ADPRHP54922 357 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 CRMP1Q14194 572 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 CCDC58Q4VC31 144 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 FIGNL1Q6PIW4 674 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 TMEFF1Q8IYR6 380 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 OR51A7Q8NH64 312 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 SMPDL3BQ92485 455 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 FBXL4Q9UKA2 621 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 HSPB11Q9Y547 144 aa23.64■■□□□ 1.37
COL13A1-203ENST00000398969 TRBV23OR9-2A0A075B6M9 112 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 TBC1D3DA0A087WVF3 549 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 TBC1D3IA0A087WXS9 549 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 TBC1D3LB9A6J9 549 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 PTP4A3O75365 173 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 RFPL3O75679 317 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 SOX30O94993 753 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 TBC1D3HP0C7X1 549 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 BCL2L15Q5TBC7 163 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 TBC1D3CQ6IPX1 549 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 PYHIN1Q6K0P9 492 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 TBC1D3Q8IZP1 549 aaPredicted RBP23.63■■□□□ 1.37
COL13A1-203ENST00000398969 CYB561A3Q8NBI2 242 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 OR1E3Q8WZA6 343 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 STACQ99469 402 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 KLHL1Q9NR64 748 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 URADA6NGE7 173 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 ATP1B1P05026 303 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 FCRL6Q6DN72 434 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 DMKNQ6E0U4 476 aaPredicted RBP23.63■■□□□ 1.37
COL13A1-203ENST00000398969 LYPD8Q6UX82 237 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 CREB3L2Q70SY1 520 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 OR5J2Q8NH18 312 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 OR4C6Q8NH72 309 aa23.63■■□□□ 1.37
COL13A1-203ENST00000398969 MRPS2Q9Y399 296 aaKnown RBP23.63■■□□□ 1.37
COL13A1-203ENST00000398969 A0A087WV62 115 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 SYNDIG1LA6NDD5 238 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 POM121BA6NF01 834 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 FGF17O60258 216 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 FZD7O75084 574 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 PPP1R3DO95685 299 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 NT5EP21589 574 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 KIR2DS3Q14952 304 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 NTRK2Q16620 822 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 ACSM3Q53FZ2 586 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 CCL4L1Q8NHW4 92 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 GRHL3Q8TE85 626 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 FAM131CQ96AQ9 280 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 HYLS1Q96M11 299 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.62■■□□□ 1.37
COL13A1-203ENST00000398969 IRF2BPLQ9H1B7 796 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 TICRRQ7Z2Z1 1910 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 LOC105369274A0A096LPK9 316 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 TNFSF14O43557 240 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 CHP2O43745 196 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 UGT2B7P16662 529 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 ZNF3P17036 446 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 LTBRP36941 435 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 SRP9P49458 86 aaKnown RBP23.62■■□□□ 1.37
COL13A1-203ENST00000398969 PPP2CBP62714 309 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 PPP2CAP67775 309 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 FCN2Q15485 313 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 FAM205BPQ63HN1 556 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 FAAH2Q6GMR7 532 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 ZNF613Q6PF04 617 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 ABHD13Q7L211 337 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 KRT74Q7RTS7 529 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 SSX6Q7RTT6 188 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 RD3Q7Z3Z2 195 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 OR4N4Q8N0Y3 316 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 SLC44A3Q8N4M1 653 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 TMEM52Q8NDY8 209 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 HSD17B8Q92506 261 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 PEX11GQ96HA9 241 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 HAO2Q9NYQ3 351 aa23.62■■□□□ 1.37
COL13A1-203ENST00000398969 GYPBP06028 91 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 ZNF10P21506 573 aaPredicted RBP23.61■■□□□ 1.37
COL13A1-203ENST00000398969 NRG3P56975 720 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 EXOSC7Q15024 291 aaKnown RBP23.61■■□□□ 1.37
COL13A1-203ENST00000398969 SLC36A2Q495M3 483 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 PRRT3Q5FWE3 981 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 HACD4Q5VWC8 232 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 OR13C5Q8NGS8 318 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 GHSRQ92847 366 aa23.61■■□□□ 1.37
COL13A1-203ENST00000398969 LYRM4Q9HD34 91 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms