RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ZNF527Q8NB42 609 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 OSTF1Q92882 214 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 INTS12Q96CB8 462 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 CAMK1GQ96NX5 476 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 OR7D2Q96RA2 312 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 FAIM2Q9BWQ8 316 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 LGR4Q9BXB1 951 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 SLC38A1Q9H2H9 487 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 EVA1AQ9H8M9 152 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ZDHHC4Q9NPG8 344 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 HINT3Q9NQE9 182 aaKnown RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 OR6C2Q9NZP2 312 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 CTSFQ9UBX1 484 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 ADAM29Q9UKF5 820 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 CHST2Q9Y4C5 530 aa14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 SIRT4Q9Y6E7 314 aaPredicted RBP14.84□□□□□ -0.03
CHMP1A-201ENST00000397901 A0A1W2PR48 441 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF593O00488 134 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 PCCBP05166 539 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 EPCAMP16422 314 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 MC3RP41968 323 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 RAB13P51153 203 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ARHGAP19Q14CB8 494 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 DHCR24Q15392 516 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 C18orf63Q68DL7 685 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ALKAL2Q6UX46 152 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF765Q7L2R6 523 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 BMPERQ8N8U9 685 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 TMEM255BQ8WV15 326 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 MED20Q9H944 212 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF275Q9NSD4 429 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 H2AFY2Q9P0M6 372 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 IGKV1-8A0A0C4DH67 115 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ANXA2P2A6NMY6 339 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ERI3O43414 337 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 SOX30O94993 753 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 TFP02787 698 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 EIF4EP06730 217 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 CISD3P0C7P0 127 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 NFYAP23511 347 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 HTR1FP30939 366 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ANXA11P50995 505 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 RGS8P57771 180 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 DPTQ07507 201 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 FZD5Q13467 585 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC9A5Q14940 896 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ZSWIM7Q19AV6 140 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 CACUL1Q86Y37 369 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 NAXDQ8IW45 347 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 OR52N1Q8NH53 320 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF764Q96H86 408 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 SAMD8Q96LT4 415 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ARHGDIGQ99819 225 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 C7orf50Q9BRJ6 194 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 NKX6-2Q9C056 277 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 PITHD1Q9GZP4 211 aaPredicted RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 DNTTIP1Q9H147 329 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 ASB6Q9NWX5 421 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 EXOGQ9Y2C4 368 aaKnown RBP14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 SLC6A5Q9Y345 797 aa14.83□□□□□ -0.04
CHMP1A-201ENST00000397901 CHD9Q3L8U1 2897 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 PRRT4C9JH25 899 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 RNF13O43567 381 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 RP2O75695 350 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 RGS9O75916 674 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 KDM4BO94953 1096 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 SNAPINO95295 136 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 IGHA1P01876 353 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 HPXP02790 462 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 AHRP35869 848 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 CCR6P51684 374 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 DEFA5Q01523 94 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 TGM3Q08188 693 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 FAM27D1Q5T7N8 215 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 FBXO46Q6PJ61 603 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 SIAH3Q8IW03 269 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 OR9A2Q8NGT5 310 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 OR1S1Q8NH92 325 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 OTUB2Q96DC9 234 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 TEX12Q9BXU0 123 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 PCBD2Q9H0N5 130 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 PRKAG2Q9UGJ0 569 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 ENTPD4Q9Y227 616 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 MCRIP1C9JLW8 97 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 LATO43561 262 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 FCMRO60667 390 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 SDC3O75056 442 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 AIFM1O95831 613 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 THY1P04216 161 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 RPN2P04844 631 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 NPR2P20594 1047 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 FPR3P25089 353 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 STXBP1P61764 594 aaKnown RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 HLXQ14774 488 aaPredicted RBP14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 HBMQ6B0K9 141 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 PLBD1Q6P4A8 553 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 SMARCD3Q6STE5 483 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 TMEM64Q6YI46 380 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 ZNF620Q6ZNG0 422 aa14.82□□□□□ -0.04
CHMP1A-201ENST00000397901 LRRTM4Q86VH4 590 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms