RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 TSSK3Q96PN8 268 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 MTERF1Q99551 399 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 LRRC61Q9BV99 259 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 RSPO3Q9BXY4 272 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 NLNQ9BYT8 704 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SYNPO2LQ9H987 977 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 B3GAT2Q9NPZ5 323 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 MGAT4BQ9UQ53 548 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 YARS2Q9Y2Z4 477 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 HRH3Q9Y5N1 445 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CLCA3PQ9Y6N3 262 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 MDC1Q14676 2089 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 USP34Q70CQ2 3546 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 FAM240BA0A1B0GVZ2 78 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 hCG_1807616A0A1W2PRN6 198 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 C7orf66A4D0T2 115 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SUV39H1O43463 412 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ADAM11O75078 769 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CSO75390 466 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 EPPINO95925 133 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CLPSP04118 112 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 KLK1P06870 262 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ACSM4P0C7M7 580 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SLC35E2P0CK97 266 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ACP5P13686 325 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 RAB3AP20336 220 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SSTR4P31391 388 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SOX3P41225 446 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 LIM2P55344 173 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CTBP2P56545 445 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 POLR2GP62487 172 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS41-203ENST00000395969 EEF1A1P68104 462 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 FUT7Q11130 342 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ILF3Q12906 894 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS41-203ENST00000395969 LGALSLQ3ZCW2 172 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 TCTE1Q5JU00 501 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ADNP2Q6IQ32 1131 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 C1orf94Q6P1W5 598 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 KLHL17Q6TDP4 642 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CHMP1BQ7LBR1 199 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CLECL1Q8IZS7 167 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 D2HGDHQ8N465 521 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 C19orf18Q8NEA5 215 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 OR11H7Q8NGC8 314 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SLC38A5Q8WUX1 472 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 CIDECQ96AQ7 238 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 SGTBQ96EQ0 304 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 GAS2L1Q99501 681 aaPredicted RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 FEVQ99581 238 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 DPH7Q9BTV6 452 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 ACTRT3Q9BYD9 372 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 SLC6A15Q9H2J7 730 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 IGFLR1Q9H665 355 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 EXOSC4Q9NPD3 245 aaKnown RBP4.97□□□□□ -1.61
VPS41-203ENST00000395969 FAM86C1Q9NVL1 165 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 FBXO4Q9UKT5 387 aa4.97□□□□□ -1.61
VPS41-203ENST00000395969 A0A0A6YYJ9 748 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 PRAMEF27A3QJZ7 478 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 TLCD2A6NGC4 264 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 INMT-MINDY4F8WBC2 141 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 SLC30A4O14863 429 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 CDRT1O95170 752 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 AIFM1O95831 613 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 EML2O95834 649 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 C6orf47O95873 294 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 WNT1P04628 370 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 HMGN1P05114 100 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 CD1AP06126 327 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 POU2F1P14859 743 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 TYRP1P17643 537 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 APEX1P27695 318 aaKnown RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 SLC6A1P30531 599 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 SSTR2P30874 369 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 RBM34P42696 430 aaKnown RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 PPP3R1P63098 170 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 PUDPQ08623 228 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 FCN2Q15485 313 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 TMEM44Q2T9K0 475 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 PRICKLE4Q2TBC4 344 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 MEDAGQ5VYS4 303 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 LRFN4Q6PJG9 635 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 RTL4Q6ZR62 310 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 CA13Q8N1Q1 262 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 Q8N402 240 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 ZSCAN1Q8NBB4 408 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 MORN4Q8NDC4 146 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 GPR32P1Q8NGA4 272 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 OR6M1Q8NGM8 313 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 ANKRD9Q96BM1 317 aaPredicted RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 CNRIP1Q96F85 164 aaPredicted RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 SCMH1Q96GD3 660 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 PRRC1Q96M27 445 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 SECISBP2Q96T21 854 aaKnown RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 HBEGFQ99075 208 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 C12orf57Q99622 126 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 GSX2Q9BZM3 304 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 TINAGL1Q9GZM7 467 aaPredicted RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 SLC26A1Q9H2B4 701 aa4.96□□□□□ -1.61
VPS41-203ENST00000395969 TXNL4BQ9NX01 149 aaKnown RBP4.96□□□□□ -1.61
VPS41-203ENST00000395969 SPHK1Q9NYA1 384 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms