RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 DEFB133Q30KQ1 61 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF529Q6P280 563 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CNIH2Q6PI25 160 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM163Q8TC26 289 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PAPOLGQ9BWT3 736 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TAAR2Q9P1P5 351 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FBXO7Q9Y3I1 522 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 COL16A1Q07092 1604 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FAM230AA0A1W2PPH8 454 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 A8MV72 311 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FANCGO15287 622 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 HTR3BO95264 441 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ITGB2P05107 769 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FKBP2P26885 142 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 GPR18Q14330 331 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MPEG1Q2M385 716 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 C18orf21Q32NC0 220 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ACTBL2Q562R1 376 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PIANPQ8IYJ0 282 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PRR18Q8N4B5 295 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SDR9C7Q8NEX9 313 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR14A16Q8NHC5 309 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CDS1Q92903 461 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ZMYND19Q96E35 227 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MOKQ9UQ07 419 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 IER3IP1Q9Y5U9 82 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CACNG2Q9Y698 323 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SCN1AP35498 2009 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TRBV11-1A0A0K0K1C0 115 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TMEM212A6NML5 194 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 A8MXE2 369 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 H3BMQ9 156 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 UBFD1O14562 309 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MPPED1O15442 326 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 DPM1O60762 260 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FOXA1P55317 472 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR1Q1Q15612 314 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 METAP1DQ6UB28 335 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TECPR1Q7Z6L1 1165 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 PLPP6Q8IY26 295 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 COG8Q96MW5 612 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 POLHQ9Y253 713 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 DOCK5Q9H7D0 1870 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 A0A087WUU8 490 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 IL1AP01583 271 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TK1P04183 234 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ARSAP15289 507 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 POU3F2P20265 443 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 STT3AP46977 705 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 RGS6P49758 472 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 AFF3P51826 1226 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TAS2R19P59542 299 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FXYD4P59646 89 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 BOLLQ8N9W6 283 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 EPHX3Q9H6B9 360 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 DCDC2BA2VCK2 349 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 GALR3O60755 368 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TSPAN15O95858 294 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TFPTP0C1Z6 253 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 DRD5P21918 477 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 HSD11B1LQ7Z5J1 315 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MKXQ8IYA7 352 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SPARTQ8N0X7 666 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR4M1Q8NGD0 313 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 FAM71F1Q96KD3 344 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SLC46A2Q9BY10 475 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR52D1Q9H346 318 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 NXT1Q9UKK6 140 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 A0A0A6YYH2 397 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TCRBV3S1A0A5B6 114 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 A6NJ64 397 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SLC9B1P1A6NJY1 282 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 RNF212BA8MTL3 300 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ALDOBP05062 364 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 GAAP10253 952 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CPMP14384 443 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 HLA-FP30511 346 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 IDUAP35475 653 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CX3CR1P49238 355 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 GK2Q14410 553 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SLC22A6Q4U2R8 563 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF322Q6U7Q0 402 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 C19orf47Q8N9M1 422 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 OR51Q1Q8NH59 317 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 POC1BQ8TC44 478 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MUCL1Q96DR8 90 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 AK6Q9Y3D8 172 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 SCN3AQ9NY46 2000 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 EEF1E1-BLOC1S5C9J1V9 151 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MPIG6BO95866 241 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 HOXD9P28356 352 aaPredicted RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CAV2P51636 162 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 WNT7BP56706 349 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 TNFRSF17Q02223 184 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 EXOSC6Q5RKV6 272 aaKnown RBP5.11□□□□□ -1.59
VPS13C-204ENST00000395898 CLVS2Q5SYC1 327 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 MARCH8Q5T0T0 291 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 AGAP7PQ5VUJ5 663 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 AGAP6Q5VW22 663 aa5.11□□□□□ -1.59
VPS13C-204ENST00000395898 ALKAL1Q6UXT8 129 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms