RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 HCCSP53701 268 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 POU6F2P78424 691 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 FAM131AQ6UXB0 335 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 PMM1Q92871 262 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 TRIM63Q969Q1 353 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 SPACA7Q96KW9 195 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 LRRN3Q9H3W5 708 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 ELK1P19419 428 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 TLX1P31314 330 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 AKT2P31751 481 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 RPS4XP62701 263 aaKnown RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 MAT1AQ00266 395 aaKnown RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 C1orf61Q13536 156 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 DMKNQ6E0U4 476 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 ARL14Q8N4G2 192 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 FAM160A2Q8N612 972 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-202ENST00000394888 BABAM2Q9NXR7 383 aa14.16□□□□□ -0.14
CPSF7-202ENST00000394888 MEIOCA2RUB1 952 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 PRAMEF26H0Y7S4 382 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 PRKNO60260 465 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-202ENST00000394888 SBK2P0C263 348 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GSTT2P0CG29 244 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GSTT2BP0CG30 244 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 CCR5P51681 352 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 MARCH9Q86YJ5 346 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 NEIL3Q8TAT5 605 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 HSD17B8Q92506 261 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 CD180Q99467 661 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 RTN4RQ9BZR6 473 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 ZNF232Q9UNY5 417 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GRIP1Q9Y3R0 1128 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 KIR2DS5A0A0G2JLQ3 304 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 A0A0G2JNG1 304 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 FABP12A6NFH5 140 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 KIR2DS3K7RE56 304 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 RGS13O14921 159 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 MAGEB4O15481 346 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-202ENST00000394888 OIP5O43482 229 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GYPBP06028 91 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 TYRP1P17643 537 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 ERV3-1Q14264 604 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 KIR2DS5Q14953 304 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 STPG1Q5TH74 334 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GID4Q8IVV7 300 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 C19orf47Q8N9M1 422 aaKnown RBP14.15□□□□□ -0.14
CPSF7-202ENST00000394888 OR13C5Q8NGS8 318 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GRHL3Q8TE85 626 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 HMGB4Q8WW32 186 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 UPRTQ96BW1 309 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 TBX5Q99593 518 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 GFI1Q99684 422 aa14.15□□□□□ -0.14
CPSF7-202ENST00000394888 URADA6NGE7 173 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 AKAP8O43823 692 aaKnown RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 PPP1R3DO95685 299 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 TNFP01375 233 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 HMGN1P05114 100 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 GGTLC2Q14390 218 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 TMEM44Q2T9K0 475 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 DDI2Q5TDH0 399 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ZNF517Q6ZMY9 492 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 C17orf82Q86X59 251 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 CAMKK1Q8N5S9 505 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 CYB561A3Q8NBI2 242 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 OR4C3Q8NH37 302 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ZNF486Q96H40 463 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 COQ7Q99807 217 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 NMNAT2Q9BZQ4 307 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ZCCHC4Q9H5U6 513 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 A0A0A6YYC8 382 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 I3L1I5 382 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 COPZ1P61923 177 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ACBD7Q8N6N7 88 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ZNF321PQ8N8H1 164 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 RERGQ96A58 199 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 TOE1Q96GM8 510 aaKnown RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 DIRAS2Q96HU8 199 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ZNF559Q9BR84 538 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 TMEM43Q9BTV4 400 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 SLC28A3Q9HAS3 691 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 WSB2Q9NYS7 404 aaPredicted RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 LRIT1Q9P2V4 623 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 PAIP2BQ9ULR5 123 aaKnown RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 MCIDASD6RGH6 385 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 EIF4EP06730 217 aaKnown RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 SHC1P29353 583 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 HOXD12P35452 270 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 MAZP56270 477 aaKnown RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 OR12D2P58182 307 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 FUT7Q11130 342 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ILF3Q12906 894 aaKnown RBP eCLIP14.14□□□□□ -0.152e-6■■■■□ 21.5
CPSF7-202ENST00000394888 COMMD3Q9UBI1 195 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 SLC13A4Q9UKG4 626 aa14.14□□□□□ -0.15
CPSF7-202ENST00000394888 RBMX2Q9Y388 322 aaKnown RBP14.14□□□□□ -0.15
CPSF7-202ENST00000394888 ADAM10O14672 748 aa14.13□□□□□ -0.15
CPSF7-202ENST00000394888 MRPL3P09001 348 aaKnown RBP14.13□□□□□ -0.15
CPSF7-202ENST00000394888 PPP3R1P63098 170 aa14.13□□□□□ -0.15
CPSF7-202ENST00000394888 HHEXQ03014 270 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms