RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ZNF615Q8N8J6 731 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SUN5Q8TC36 379 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 LOXL4Q96JB6 756 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 NIPSNAP1Q9BPW8 284 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 DHRS9Q9BPW9 319 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 KRTAP4-12Q9BQ66 201 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ITPAQ9BY32 194 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 VN1R1Q9GZP7 353 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 DCSTAMPQ9H295 470 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 C12orf10Q9HB07 376 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ACOT13Q9NPJ3 140 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PLCXD1Q9NUJ7 323 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SIDT1Q9NXL6 827 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 STMN3Q9NZ72 180 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 KCND3Q9UK17 655 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 A4GNTQ9UNA3 340 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 SRPK3Q9UPE1 567 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 ZNF443Q9Y2A4 671 aaPredicted RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 RBMX2Q9Y388 322 aaKnown RBP6.41□□□□□ -1.38
RTN4-205ENST00000394609 OR10H1Q9Y4A9 318 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 MMACHCQ9Y4U1 282 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PCDHGB2Q9Y5G2 931 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 PCDHGA5Q9Y5G8 931 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 N6AMT1Q9Y5N5 214 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 CLCA3PQ9Y6N3 262 aa6.41□□□□□ -1.38
RTN4-205ENST00000394609 EP300Q09472 2414 aaPredicted RBP6.4□□□□□ -1.38
RTN4-205ENST00000394609 A0A075B6Q4 140 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 IGHV3-20A0A0C4DH32 117 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 HMX3A6NHT5 357 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CPSF4LA6NMK7 179 aaKnown RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 B8ZZF3 427 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 BRINP1O60477 761 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 NTN1O95631 604 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CRYZL1O95825 349 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 GASTP01350 101 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CLPSP04118 112 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 YES1P07947 543 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 GKN3PP0CG01 181 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CT45A8P0DMV1 189 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CT45A9P0DMV2 189 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 PRG2P13727 222 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 PRKAR1BP31321 381 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 TRHRP34981 398 aaPredicted RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 TGFBR2P37173 567 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 LIMK1P53667 647 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 P2RX3P56373 397 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.4□□□□□ -1.392e-6■□□□□ 8.9
RTN4-205ENST00000394609 IKZF1Q13422 519 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 RAPSNQ13702 412 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 LARS2Q15031 903 aaKnown RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 ZFP69Q49AA0 526 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CT45A2Q5DJT8 189 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 TIGD3Q6B0B8 471 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 LCN10Q6JVE6 187 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 QSOX2Q6ZRP7 698 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 LANCL3Q6ZV70 420 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 CCDC103Q8IW40 242 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 ZNF614Q8N883 585 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 AQP11Q8NBQ7 271 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 STT3BQ8TCJ2 826 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 SLC7A13Q8TCU3 470 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 UBE2FQ969M7 185 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 MEGF10Q96KG7 1140 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 LMF1Q96S06 567 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 PITX2Q99697 317 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 LMF2Q9BU23 707 aaKnown RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 FNDC11Q9BVV2 318 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 AKIRIN1Q9H9L7 192 aaPredicted RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 CACYBPQ9HB71 228 aaKnown RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 MKKSQ9NPJ1 570 aaPredicted RBP6.4□□□□□ -1.39
RTN4-205ENST00000394609 KLHL28Q9NXS3 571 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 AASSQ9UDR5 926 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 TMCC3Q9ULS5 477 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 WDFY3Q8IZQ1 3526 aa6.4□□□□□ -1.39
RTN4-205ENST00000394609 TEX51A0A1B0GUA7 166 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 TCRBV16S1A1N1A0A5B0 115 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SYT5O00445 386 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 DLL1O00548 723 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CDX4O14627 284 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 POLR1CO15160 346 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 KIAA0513O60268 411 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 OR10H3O60404 316 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 DDAH2O95865 285 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 IFI6P09912 130 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZGLP1P0C6A0 271 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CD36P16671 472 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZNF28P17035 718 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ENDOUP21128 410 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 PTNP21246 168 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 NR4A1P22736 598 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ELAVL4P26378 380 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 GRNP28799 593 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 NR4A2P43354 598 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CLK3P49761 638 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 CLDN6P56747 220 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SLC37A1P57057 533 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 RGS8P57771 180 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 OR2B6P58173 313 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 TAS2R41P59536 307 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 VBP1P61758 197 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms