RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 S100A11P31949 105 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AHRP35869 848 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RBM34P42696 430 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 DUSP3P51452 185 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 TRA2BP62995 288 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 AIMP2Q13155 320 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 GFOD2Q3B7J2 385 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 BEND4Q6ZU67 534 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PLXDC1Q8IUK5 500 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RIMKLAQ8IXN7 391 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PRSS58Q8IYP2 241 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 GTPBP8Q8N3Z3 284 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 PXT1Q8NFP0 134 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR7G2Q8NG99 324 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR9Q2Q8NGE9 314 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR5T3Q8NGG3 340 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR52L1Q8NGH7 329 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR6S1Q8NH40 331 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RAB8BQ92930 207 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PTP4A1Q93096 173 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MARVELD3Q96A59 401 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MMABQ96EY8 250 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 HRASLS5Q96KN8 279 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 C7orf34Q96L11 122 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TEX37Q96LM6 180 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR52A5Q9H2C5 316 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CTPS2Q9NRF8 586 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TXNL4BQ9NX01 149 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 CNOT2Q9NZN8 540 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 PPP4R1LQ9P1A2 415 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SLC23A2Q9UGH3 650 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RPH3AQ9Y2J0 694 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 NUMA1Q14980 2115 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 EPOPA6NHQ4 379 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AGAP14A8MT82 685 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 K7EQS6 105 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 GAPDHSO14556 408 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 CD63P08962 238 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TNFRSF1BP20333 461 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CD27P26842 260 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MNDAP41218 407 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RAP2BP61225 183 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 FAM83HQ6ZRV2 1179 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 USP53Q70EK8 1073 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TMED4Q7Z7H5 227 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RANBP3LQ86VV4 465 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 SFTPA1Q8IWL2 248 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TMEFF1Q8IYR6 380 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR10H4Q8NGA5 316 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR4M2Q8NGB6 313 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 AKR7LQ8NHP1 331 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ARL11Q969Q4 196 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 NPAS1Q99742 590 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 DOHHQ9BU89 302 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TNFRSF12AQ9NP84 129 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MYEF2Q9P2K5 600 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 COPS7AQ9UBW8 275 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 DAPL1A0PJW8 107 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CPSF4LA6NMK7 179 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 ARPC1BO15143 372 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 SIGLEC6O43699 453 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PRAF2O60831 178 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ITGA10O75578 1167 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RGS11O94810 467 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MT-ND4P03905 459 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CEACAM5P06731 702 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RNH1P13489 461 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 TACR1P25103 407 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CDH11P55287 796 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 WNT4P56705 351 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PPP2CBP62714 309 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PPP2CAP67775 309 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MC1RQ01726 317 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OC90Q02509 493 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 CHAF1BQ13112 559 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MFSD13AQ14CX5 517 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 PTGES3Q15185 160 aaKnown RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 DEFB133Q30KQ1 61 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 RNF212Q495C1 297 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 EIPR1Q53HC9 387 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 Q5BKY6 102 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ZNF311Q5JNZ3 666 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CLEC12AQ5QGZ9 265 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 MTFR2Q6P444 385 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TMEM179BQ7Z7N9 219 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 C9orf62Q8N4C0 152 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ACOT4Q8N9L9 421 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 SMRP1Q8NCR6 262 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ZNF740Q8NDX6 193 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 NUP43Q8NFH3 380 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR52N2Q8NGI0 321 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 OR56B4Q8NH76 319 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 CHAC2Q8WUX2 184 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ACOT11Q8WXI4 607 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 SERINC2Q96SA4 455 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 GABRG3Q99928 467 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 ZNF251Q9BRH9 671 aa5.31□□□□□ -1.56
RFFL-202ENST00000394597 TINAGL1Q9GZM7 467 aaPredicted RBP5.31□□□□□ -1.56
RFFL-202ENST00000394597 ACTL8Q9H568 366 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms