RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 FOLR2P14207 255 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 CNR1P21554 472 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 SHC1P29353 583 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 MLLT1Q03111 559 aaPredicted RBP17.53■□□□□ 0.4
HOXC6-202ENST00000394331 IL10RAQ13651 578 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 AADACL4Q5VUY2 407 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 OLFML2AQ68BL7 652 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 CDC73Q6P1J9 531 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 TMPRSS11BQ86T26 416 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 KLBQ86Z14 1044 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF69Q9UC07 566 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 MKL2Q9ULH7 1088 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 PGRMC2O15173 223 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 MGMTP16455 207 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 RAD52P43351 418 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ARHGDIBP52566 201 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF763Q0D2J5 394 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF791Q3KP31 576 aaPredicted RBP17.53■□□□□ 0.4
HOXC6-202ENST00000394331 LRRN1Q6UXK5 716 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 OR14A16Q8NHC5 309 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ZFP3Q96NJ6 502 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 EFCAB11Q9BUY7 163 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 ENKD1Q9H0I2 346 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 OR10A4Q9H209 315 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 SEBOXQ9HB31 216 aaPredicted RBP17.53■□□□□ 0.4
HOXC6-202ENST00000394331 A4GNTQ9UNA3 340 aa17.53■□□□□ 0.4
HOXC6-202ENST00000394331 FOXE1O00358 373 aaPredicted RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 ARPC1BO15143 372 aaKnown RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 GP1BAP07359 652 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 CTSLP07711 333 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 KCNJ3P48549 501 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 SNTB1Q13884 538 aaKnown RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 PAN3Q58A45 887 aaKnown RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 C1orf53Q5VUE5 145 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 PXKQ7Z7A4 578 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 MVB12BQ9H7P6 319 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 CACYBPQ9HB71 228 aaKnown RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 MED17Q9NVC6 651 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 DYRK1BQ9Y463 629 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 PLEKHM1Q9Y4G2 1056 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 EIF4E2O60573 245 aaKnown RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 C1orf105O95561 183 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 GUCA2BQ16661 112 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 OR4F15Q8NGB8 312 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 OR4K5Q8NGD3 323 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 OR4K1Q8NGD4 311 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 SMAP2Q8WU79 429 aaPredicted RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 ZNF480Q8WV37 535 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 WDR34Q96EX3 536 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 CMSS1Q9BQ75 279 aaKnown RBP17.52■□□□□ 0.4
HOXC6-202ENST00000394331 ZFP57Q9NU63 452 aa17.52■□□□□ 0.4
HOXC6-202ENST00000394331 TMEM218A2RU14 115 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 TRAPPC13A5PLN9 417 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 J3QRE1 110 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 SCAMP1O15126 338 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 NDUFS6O75380 124 aaKnown RBP17.51■□□□□ 0.39
HOXC6-202ENST00000394331 PDHA2P29803 388 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 PBLDP30039 288 aaPredicted RBP17.51■□□□□ 0.39
HOXC6-202ENST00000394331 OR10A3P58181 314 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 TNFRSF17Q02223 184 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 MPPED2Q15777 294 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 MAPK14Q16539 360 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 USP53Q70EK8 1073 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 HDDC3Q8N4P3 179 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 MFRPQ9BY79 579 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 CARHSP1Q9Y2V2 147 aaKnown RBP17.51■□□□□ 0.39
HOXC6-202ENST00000394331 SIGLEC5O15389 551 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 ASGR2P07307 311 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF8P17098 575 aaPredicted RBP17.51■□□□□ 0.39
HOXC6-202ENST00000394331 HTR1FP30939 366 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 TBPL1P62380 186 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 SIGLEC14Q08ET2 396 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 ECH1Q13011 328 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 MORN4Q8NDC4 146 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 OTUB2Q96DC9 234 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 NOX3Q9HBY0 568 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 A0A1B0GTQ1 180 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 C5orf58C9J3I9 102 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 GPR31O00270 319 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 UBE2CO00762 179 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 LCMT2O60294 686 aaKnown RBP17.51■□□□□ 0.39
HOXC6-202ENST00000394331 REM1O75628 298 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 CCL5P13501 91 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 PRF1P14222 555 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 SFRP4Q6FHJ7 346 aaPredicted RBP17.51■□□□□ 0.39
HOXC6-202ENST00000394331 PHYHIPLQ96FC7 376 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 PLA2G12AQ9BZM1 189 aa17.51■□□□□ 0.39
HOXC6-202ENST00000394331 CCDC88CQ9P219 2028 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 MOSPD3O75425 235 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 GATBO75879 557 aaKnown RBP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 C1GALT1C1LP0DN25 315 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 ACADLP28330 430 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 VASPP50552 380 aaPredicted RBP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 SLBPQ14493 270 aaKnown RBP eCLIP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 ZNF77Q15935 545 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 TMEM88Q6PEY1 159 aa17.5■□□□□ 0.39
HOXC6-202ENST00000394331 RNF113BQ8IZP6 322 aaKnown RBP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 ZCCHC2Q9C0B9 1178 aaKnown RBP17.5■□□□□ 0.39
HOXC6-202ENST00000394331 RSPH9Q9H1X1 276 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms