RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 METTL2BQ6P1Q9 378 aaKnown RBP12.67□□□□□ -0.38
USP49-203ENST00000394253 FCF1Q9Y324 198 aaKnown RBP12.67□□□□□ -0.38
USP49-203ENST00000394253 HES2Q9Y543 173 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 TEX264Q9Y6I9 313 aa12.67□□□□□ -0.38
USP49-203ENST00000394253 DEDDO75618 318 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SIX3O95343 332 aaPredicted RBP12.66□□□□□ -0.38
USP49-203ENST00000394253 SLC16A6O15403 523 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SSTR4P31391 388 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 TPPP2P59282 170 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 RHEBL1Q8TAI7 183 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 LPPQ93052 612 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 MYLKQ15746 1914 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 FAM24AA6NFZ4 105 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 GLOD5A6NK44 160 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 TACR3P29371 465 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SDHAF4Q5VUM1 108 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SUV39H2Q9H5I1 410 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 TAF9BQ9HBM6 251 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 EXOSC3Q9NQT5 275 aaKnown RBP12.66□□□□□ -0.38
USP49-203ENST00000394253 TMEM233B4DJY2 109 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 M0R3H8 397 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 GPR37L1O60883 481 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 HOXB5P09067 269 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SCGB1A1P11684 91 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 HLA-DMAP28067 261 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 PCBD1P61457 104 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 NFATC2Q13469 925 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 AAK1Q2M2I8 961 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 CRLF2Q9HC73 371 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 A0A0U1RQJ8 604 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 TISP43B9A030 160 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 KIAA0355O15063 1070 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SEC13P55735 322 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 RNF111Q6ZNA4 994 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 LRRTM1Q86UE6 522 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 ZNF561Q8N587 486 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 ASB17Q8WXJ9 295 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 ATF6BQ99941 703 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 SLC12A9Q9BXP2 914 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 CPA4Q9UI42 421 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 HIDE1A8MVS5 230 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 FOXO6A8MYZ6 492 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 PDZD11Q5EBL8 140 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 BEX5Q5H9J7 111 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 B3GNT9Q6UX72 402 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 LMF2Q9BU23 707 aaKnown RBP12.66□□□□□ -0.38
USP49-203ENST00000394253 RHBDD3Q9Y3P4 386 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 V9GY05 133 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 JCADQ9P266 1359 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 PTHP01270 115 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 ZNF17P17021 662 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 PTGIRP43119 386 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 GGHQ92820 318 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 HLA-CQ95604 372 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 ANKRD60Q9BZ19 345 aa12.66□□□□□ -0.38
USP49-203ENST00000394253 C2CD4BA6NLJ0 364 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 KCNE1P15382 129 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 GAS2L1Q99501 681 aaPredicted RBP12.65□□□□□ -0.38
USP49-203ENST00000394253 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
USP49-203ENST00000394253 LOC105369274A0A096LPK9 316 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 CPNE6O95741 557 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 LCATP04180 440 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 ALPIP09923 528 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 RAB13P51153 203 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 TMEM244Q5VVB8 128 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 PRAMEF8Q5VWM4 474 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 PRAMEF7Q5VXH5 474 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 CLEC9AQ6UXN8 241 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 TIFABQ6ZNK6 161 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 OR4N4Q8N0Y3 316 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 FOXJ1Q92949 421 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 TIMM29Q9BSF4 260 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 ANKRD66B4E2M5 251 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 DUSP11O75319 330 aaKnown RBP12.65□□□□□ -0.38
USP49-203ENST00000394253 MMP2P08253 660 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 PTNP21246 168 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 ENPP1P22413 925 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 RPL11P62913 178 aaKnown RBP12.65□□□□□ -0.38
USP49-203ENST00000394253 TESK1Q15569 626 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 LRRC73Q5JTD7 316 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 AGTRAPQ6RW13 159 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 Q6ZRG5 221 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 PRR11Q96HE9 360 aaPredicted RBP12.65□□□□□ -0.38
USP49-203ENST00000394253 ACTL7AQ9Y615 435 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 MYO5AQ9Y4I1 1855 aaKnown RBP12.65□□□□□ -0.38
USP49-203ENST00000394253 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 JTBO76095 146 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 GABRA5P31644 462 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 ACSM1Q08AH1 577 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 AADACL3Q5VUY0 350 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 SLC6A19Q695T7 634 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 WDR5BQ86VZ2 330 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 NAT8LQ8N9F0 302 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 CDS1Q92903 461 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 GBAP04062 536 aa12.65□□□□□ -0.38
USP49-203ENST00000394253 OSMP13725 252 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms