RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 CHD9Q3L8U1 2897 aa17.42■□□□□ 0.38
CBX1-202ENST00000393408 TRAV6A0A075B6T7 132 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 A0A087WV62 115 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ZNF860A6NHJ4 632 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 SLC31A1O15431 190 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ATP1B1P05026 303 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ZNF3P17036 446 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 RAB3BP20337 219 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ACTC1P68032 377 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ACTA1P68133 377 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ANKRD54Q6NXT1 300 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ZNF613Q6PF04 617 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 OR13C5Q8NGS8 318 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 OR5H6Q8NGV6 325 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 GHSRQ92847 366 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 BADQ92934 168 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 PLA2G2FQ9BZM2 168 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 MKRN2Q9H000 416 aaKnown RBP17.41■□□□□ 0.38
CBX1-202ENST00000393408 DPAGT1Q9H3H5 408 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ST6GALNAC2Q9UJ37 374 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ATG2BQ96BY7 2078 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 TNFSF14O43557 240 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 FGF17O60258 216 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 LDB3O75112 727 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 PYCR1P32322 319 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 CAPZA2P47755 286 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 TMEFF1Q8IYR6 380 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 MS4A15Q8N5U1 240 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 YIPF5Q969M3 257 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 ZNF559Q9BR84 538 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 USP36Q9P275 1121 aaKnown RBP17.41■□□□□ 0.38
CBX1-202ENST00000393408 SLC23A1Q9UHI7 598 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 BAIAP2Q9UQB8 552 aa17.41■□□□□ 0.38
CBX1-202ENST00000393408 URADA6NGE7 173 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 GYPBP06028 91 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 MAP3K8P41279 467 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 P2RX3P56373 397 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 KIR2DS3Q14952 304 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 FCRL6Q6DN72 434 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 LRRC17Q8N6Y2 441 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 BMPERQ8N8U9 685 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 OR11H7Q8NGC8 314 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 GRHL3Q8TE85 626 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 OR1E3Q8WZA6 343 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 FAM131CQ96AQ9 280 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 PHF21AQ96BD5 680 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 SLC6A17Q9H1V8 727 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 LYRM4Q9HD34 91 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 C14orf105Q9NVL8 296 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 MRPL39Q9NYK5 338 aaKnown RBP17.4■□□□□ 0.38
CBX1-202ENST00000393408 MRPS2Q9Y399 296 aaKnown RBP17.4■□□□□ 0.38
CBX1-202ENST00000393408 NUBP2Q9Y5Y2 271 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 LOC105369274A0A096LPK9 316 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 TRAV1-2A0A0B4J238 106 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 GXYLT2A0PJZ3 443 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 BRINP1O60477 761 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 PEPDP12955 493 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 MYOGP15173 224 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 NT5EP21589 574 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 STOMP27105 288 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 ADPRHP54922 357 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 EXOSC7Q15024 291 aaKnown RBP17.4■□□□□ 0.38
CBX1-202ENST00000393408 ANGPT1Q15389 498 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 ZCCHC12Q6PEW1 402 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 LYPD4Q6UWN0 246 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 OR4N4Q8N0Y3 316 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 RFLNBQ8N5W9 214 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 TMEM52Q8NDY8 209 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 TTC9Q92623 222 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 CITED4Q96RK1 184 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 TMEM27Q9HBJ8 222 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 EMC7Q9NPA0 242 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 SLCO1C1Q9NYB5 712 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 PILRAQ9UKJ1 303 aa17.4■□□□□ 0.38
CBX1-202ENST00000393408 TRBV23OR9-2A0A075B6M9 112 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 A0A0B4J2E0 115 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 A0A1B0GX12 115 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 A0A1W2PRG6 482 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 SYNDIG1LA6NDD5 238 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 POM121BA6NF01 834 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 HYAL3O43820 417 aaPredicted RBP17.39■□□□□ 0.37
CBX1-202ENST00000393408 AK1P00568 194 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TCRBP04435 133 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 UGT2B7P16662 529 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 SEC13P55735 322 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 FHL1Q13642 323 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 PRICKLE4Q2TBC4 344 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ABHD13Q7L211 337 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 ZAR1Q86SH2 424 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 HAVCR2Q8TDQ0 301 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TNFRSF13CQ96RJ3 184 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TWSG1Q9GZX9 223 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 IL21RQ9HBE5 538 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 MAT2BQ9NZL9 334 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 FLRT3Q9NZU0 649 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 FBXL21Q9UKT6 434 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TBC1D3DA0A087WVF3 549 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TBC1D3IA0A087WXS9 549 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 TBC1D3LB9A6J9 549 aa17.39■□□□□ 0.37
CBX1-202ENST00000393408 UBL3O95164 117 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms