RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 FAM220AQ7Z4H9 259 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 ACOT1Q86TX2 421 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 TPRA1Q86W33 373 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 ZNF573Q86YE8 665 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 GRAMD2AQ8IUY3 354 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 RNF175Q8N4F7 328 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 CLDN19Q8N6F1 224 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 KIR3DL3Q8N743 410 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 GPATCH11Q8N954 259 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 DCAF4L2Q8NA75 395 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 LINC01555Q8NAE3 123 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 DENND6BQ8NEG7 585 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 OR1E3Q8WZA6 343 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 RPL3LQ92901 407 aaKnown RBP1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 SLC35E1Q96K37 410 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 C4orf36Q96KX1 117 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 C7orf34Q96L11 122 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 PGLYRP4Q96LB8 373 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 C12orf66Q96MD2 445 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 PLEKHF1Q96S99 279 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 MCHR1Q99705 422 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 ARHGDIGQ99819 225 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 EBF4Q9BQW3 602 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 RNF126Q9BV68 326 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 TMEM117Q9H0C3 514 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 MAGT1Q9H0U3 335 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 OR51J1Q9H342 316 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 NARFLQ9H6Q4 476 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 ZDHHC11Q9H8X9 412 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 LIN28AQ9H9Z2 209 aaKnown RBP1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 CALHM2Q9HA72 323 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 APMAPQ9HDC9 416 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 FARSBQ9NSD9 589 aaKnown RBP1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 NUDT15Q9NV35 164 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 GNG12Q9UBI6 72 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 WARS2Q9UGM6 360 aaKnown RBP1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 LCMT1Q9UIC8 334 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 BTNL2Q9UIR0 455 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 LAMP5Q9UJQ1 280 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 OR10H1Q9Y4A9 318 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 ALG6Q9Y672 507 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 MAD1L1Q9Y6D9 718 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 SLCO1B1Q9Y6L6 691 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 CHD4Q14839 1912 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 SF3B1O75533 1304 aaKnown RBP eCLIP1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 TTC21BQ7Z4L5 1316 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 KIF16BQ96L93 1317 aa1.13□□□□□ -2.23
RNU6-440P-201ENST00000390882 PNPLA6Q8IY17 1366 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 IGKV6D-21A0A0A0MT36 114 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 A0A1B0GUA9 196 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 A8MUA0 341 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 A8MUI8 341 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 TRIM49D1C9J1S8 452 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 PANO1I0J062 215 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 KIF2AO00139 706 aaPredicted RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 RS1O15537 224 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ZSCAN12O43309 604 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ZNF861PO60384 105 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 TPST2O60704 377 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 NOL3O60936 208 aaKnown RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 PEX11AO75192 247 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 BCAS1O75363 584 aaPredicted RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 SUPT7LO94864 414 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 UFL1O94874 794 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 SLITRK3O94933 977 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 CA1P00915 261 aaPredicted RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 IFNB1P01574 187 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 KRT8P05787 483 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 PTMAP06454 111 aaKnown RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 HEXBP07686 556 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 KRT13P13646 458 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 POLR2EP19388 210 aaKnown RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ATP6V1C1P21283 382 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 MDKP21741 143 aaPredicted RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 COX7A1P24310 79 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ANXA13P27216 316 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ADSSP30520 456 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 YWHABP31946 246 aaKnown RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 CD80P33681 288 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 CHI3L1P36222 383 aaPredicted RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 CAV2P51636 162 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 APOC4P55056 127 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 HSD17B7P56937 341 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 NUP107P57740 925 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 POLR2FP61218 127 aaKnown RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 CSNK1G2P78368 415 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 CNTN2Q02246 1040 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 PSG7Q13046 419 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 SELPLGQ14242 412 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 MESDQ14696 234 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ARL6IP1Q15041 203 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 USH1GQ495M9 461 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 GGTA1PQ4G0N0 100 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 RIPPLY2Q5TAB7 128 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 ZNF530Q6P9A1 599 aaPredicted RBP1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 IGFL2Q6UWQ7 119 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 IL34Q6ZMJ4 242 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 GDPD3Q7L5L3 318 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 VRK2Q86Y07 508 aa1.12□□□□□ -2.23
RNU6-440P-201ENST00000390882 MKXQ8IYA7 352 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms