RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 PEX7O00628 323 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MEIS2O14770 477 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 KPNA5O15131 536 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 DUX1O43812 170 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TYROBPO43914 113 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA0513O60268 411 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SELENOFO60613 162 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRAMEF11O60813 436 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CDH16O75309 829 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ENTPD3O75355 529 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NDUFS3O75489 264 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CLSTN1O94985 981 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ETHE1O95571 254 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OLFM2O95897 454 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZBED1O96006 694 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PENKP01210 267 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 IGHV2-70P01814 119 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OPN1LWP04000 364 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 P04436 131 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRM1P04553 51 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 URODP06132 367 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CD55P08174 381 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CT62P0C5K7 136 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZDHHC11BP0C7U3 371 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 GHRP10912 638 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRPS2P11908 318 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RNASE3P12724 160 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 F3P13726 295 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 COX7A2P14406 83 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF708P17019 499 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SDC1P18827 310 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 BCKDHBP21953 392 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 UCP1P25874 307 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ADORA2BP29275 332 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 BLVRBP30043 206 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CASP14P31944 242 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SPRR2AP35326 72 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 HTR2BP41595 481 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RAD52P43351 418 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MAGEA5P43359 124 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CRKLP46109 303 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR3A3P47888 321 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 OR1G1P47890 313 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RPL29P47914 159 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NPBWR2P48146 333 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 HSPA7P48741 367 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FHITP49789 147 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF137PP52743 207 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 F2RL1P55085 397 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CASP6P55212 293 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CDH4P55283 916 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FOXA1P55317 472 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PLP1P60201 277 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RPL27P61353 136 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SIRPAP78324 504 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ARG2P78540 354 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 QRFPP83859 136 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PLOD1Q02809 727 aaPredicted RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF92Q03936 586 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CACNG1Q06432 222 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NIPAL4Q0D2K0 466 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 LCP2Q13094 533 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 MAB21L1Q13394 359 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CUL3Q13618 768 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 VEZF1Q14119 521 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 BECN1Q14457 450 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PDIA5Q14554 519 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF266Q14584 549 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 CDK5R1Q15078 307 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PPA1Q15181 289 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 RALBP1Q15311 655 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZRSR2Q15696 482 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NPTX1Q15818 432 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 NNATQ16517 81 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 GSTA3Q16772 222 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 EXOC3L2Q2M3D2 409 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SMU1Q2TAY7 513 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM249Q2WGJ8 235 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF699Q32M78 642 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PCGF3Q3KNV8 242 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ADPRMQ3LIE5 342 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC25A52Q3SY17 297 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM98BQ52LJ0 330 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 BOLA3Q53S33 107 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PDZD11Q5EBL8 140 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ACSBG2Q5FVE4 666 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 COA6Q5JTJ3 125 aaKnown RBP-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TEX30Q5JUR7 227 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 LDLRAD2Q5SZI1 272 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C6orf52Q5T4I8 152 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ATF7IP2Q5U623 682 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C1orf189Q5VU69 101 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 C1orf146Q5VVC0 180 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 FAM46CQ5VWP2 391 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ANKRD22Q5VYY1 191 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PLPP4Q5VZY2 271 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC66Q68CR7 880 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 ACAD10Q6JQN1 1059 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 PRMT9Q6P2P2 845 aa-0.55□□□□□ -2.5
TRAJ28-201ENST00000390509 TTC27Q6P3X3 843 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms