RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 DLL4Q9NR61 685 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 MED9Q9NWA0 146 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 TEX10Q9NXF1 929 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 BABAM2Q9NXR7 383 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 WSB2Q9NYS7 404 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 H2AFY2Q9P0M6 372 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 CSNK1G3Q9Y6M4 447 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 TRBV23OR9-2A0A075B6M9 112 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 A0A0G2JN53 185 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 A0A0G2JPF8 293 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 A0A1W2PPL8 197 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 HNRNPCL2B2RXH8 293 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 HNRNPCL3B7ZW38 293 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 J3QRE1 110 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 M0R233 179 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 PPM1DO15297 605 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ERI3O43414 337 aaKnown RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 PRAF2O60831 178 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 B4GALT2O60909 372 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 MPC2O95563 127 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 HNRNPCL4P0DMR1 293 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 HOXB3P14651 431 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ATF4P18848 351 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 TAS2R41P59536 307 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ST3GAL3Q11203 375 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 MAP4K2Q12851 820 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 DYRK1AQ13627 763 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 SLC9A5Q14940 896 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF791Q3KP31 576 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ABHD17CQ6PCB6 329 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 LYPD4Q6UWN0 246 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF793Q6ZN11 406 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 BMP8AQ7Z5Y6 402 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 COMTD1Q86VU5 262 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 PAQR7Q86WK9 346 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 NR2C2APQ86WQ0 139 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 GPR135Q8IZ08 494 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 SLC22A18ASQ8N1D0 253 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF687Q8N1G0 1237 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 ACBD7Q8N6N7 88 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 AMER3Q8N944 861 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 GPBAR1Q8TDU6 330 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 XAGE5Q8WWM1 108 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 HSD17B8Q92506 261 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 FAIM2Q9BWQ8 316 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 CACNG6Q9BXT2 260 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 OR51I1Q9H343 314 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 LMAN1LQ9HAT1 526 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 INPP5EQ9NRR6 644 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 EVA1BQ9NVM1 165 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 GLS2Q9UI32 602 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 NPFFR2Q9Y5X5 522 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 SESN1Q9Y6P5 492 aa8.29□□□□□ -1.08
GPNMB-202ENST00000381990 TNRC18O15417 2968 aaPredicted RBP8.29□□□□□ -1.08
GPNMB-202ENST00000381990 PRAMEF27A3QJZ7 478 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 FZD7O75084 574 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 HOXD4P09016 255 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 PAICSP22234 425 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 HIST1H1TP22492 207 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 LCN1P31025 176 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 TSFMP43897 325 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 TAS2R43P59537 309 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 RPS15AP62244 130 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 GARNL3Q5VVW2 1013 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 TSTD1Q8NFU3 115 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 FLVCR1-AS1Q8TAF5 88 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 EXOSC8Q96B26 276 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 ABHD1Q96SE0 405 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 GSDMCQ9BYG8 508 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 PRDM7Q9NQW5 492 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 GPR27Q9NS67 375 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 RDH8Q9NYR8 311 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 ENTPD4Q9Y227 616 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 RASD1Q9Y272 281 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 SPTY2D1-AS1A0A0U1RR47 76 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 SSNA1O43805 119 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 ZNF217O75362 1048 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 STATHP02808 62 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 IFNA16P05015 189 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 ATP5A1P25705 553 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 GIFP27352 417 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 BUD31P41223 144 aaPredicted RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 OMPP47874 163 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 STXBP1P61764 594 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 TGM3Q08188 693 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 EIF2B5Q13144 721 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 FZD5Q13467 585 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 GPR18Q14330 331 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 INSL4Q14641 139 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 PGGHGQ32M88 737 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 NDUFAF5Q5TEU4 345 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 MRM1Q6IN84 353 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 FAM180BQ6P0A1 224 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 TMEM64Q6YI46 380 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 ACOT4Q8N9L9 421 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 OR2T33Q8NG76 320 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 OR2T4Q8NH00 348 aa8.28□□□□□ -1.08
GPNMB-202ENST00000381990 TRMT10AQ8TBZ6 339 aaKnown RBP8.28□□□□□ -1.08
GPNMB-202ENST00000381990 GIMAP1Q8WWP7 306 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms