RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PDZK1Q5T2W1 519 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 HEPHL1Q6MZM0 1159 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 C16orf62Q7Z3J2 963 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 YTHDF3Q7Z739 585 aaKnown RBP11.56□□□□□ -0.56
RPAIN-202ENST00000381208 WFDC8Q8IUA0 241 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 GABRG1Q8N1C3 465 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 OR5D16Q8NGK9 328 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 OR5AK3PQ8NH89 298 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 KISS1RQ969F8 398 aaPredicted RBP11.56□□□□□ -0.56
RPAIN-202ENST00000381208 PLPPR2Q96GM1 343 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 COX4I2Q96KJ9 171 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 TMEM204Q9BSN7 226 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 SRXN1Q9BYN0 137 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 ESRP2Q9H6T0 727 aaKnown RBP11.56□□□□□ -0.56
RPAIN-202ENST00000381208 C12orf49Q9H741 205 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 AKTIPQ9H8T0 292 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 BCO1Q9HAY6 547 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 HAO1Q9UJM8 370 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 RAB21Q9UL25 225 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 KCNE3Q9Y6H6 103 aa11.56□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF724A8MTY0 619 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 HS3ST1O14792 307 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ANKRD28O15084 1053 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 EFNA2O43921 213 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 GCM2O75603 506 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-202ENST00000381208 CSTAP01040 98 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 HEXAP06865 529 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 CREB1P16220 341 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ENPP1P22413 925 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 SHC1P29353 583 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ANXA11P50995 505 aaKnown RBP11.55□□□□□ -0.56
RPAIN-202ENST00000381208 LRRC74AQ0VAA2 488 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ITGADQ13349 1161 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 GPR68Q15743 365 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 PDCD2Q16342 344 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-202ENST00000381208 SFRP5Q5T4F7 317 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 AP1ARQ63HQ0 302 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 OR4F3Q6IEY1 312 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ADAM5Q6NVV9 412 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 C22orf34Q6ZV56 151 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 TUSC5Q8IXB3 177 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF781Q8N8C0 355 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 OR4A15Q8NGL6 344 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 RFWD2Q8NHY2 731 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 PERPQ96FX8 193 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 Q96MF0 132 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 POTEKPQ9BYX7 375 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 COQ10BQ9H8M1 238 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF701Q9NV72 531 aaPredicted RBP11.55□□□□□ -0.56
RPAIN-202ENST00000381208 PRDM4Q9UKN5 801 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 HIVEP2P31629 2446 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 USF3Q68DE3 2245 aa11.55□□□□□ -0.56
RPAIN-202ENST00000381208 OIP5O43482 229 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 KIAA0513O60268 411 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 UGT2B17O75795 530 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 DHRS4L1P0CG22 281 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 LBPP18428 481 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 APOBEC1P41238 236 aaKnown RBP11.54□□□□□ -0.56
RPAIN-202ENST00000381208 SLC1A6P48664 564 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 PTH2RP49190 550 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 CLK1P49759 484 aaKnown RBP11.54□□□□□ -0.56
RPAIN-202ENST00000381208 SESN3P58005 492 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 HPCAP84074 193 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 RASGEF1BQ0VAM2 473 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 SKP2Q13309 424 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 TOMM34Q15785 309 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-202ENST00000381208 ETFDHQ16134 617 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 TIGD2Q4W5G0 525 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 TMPPEQ6ZT21 453 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 Q6ZT83 130 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 P2RY8Q86VZ1 359 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 CLECL1Q8IZS7 167 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 TRIML2Q8N7C3 387 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 ATP6V1C2Q8NEY4 427 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 IGFBPL1Q8WX77 278 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 S100PBPQ96BU1 408 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 ZHX1-C8orf76Q96EF9 292 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 NEURL3Q96EH8 262 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 KLHDC3Q9BQ90 382 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 THUMPD3Q9BV44 507 aaKnown RBP11.54□□□□□ -0.56
RPAIN-202ENST00000381208 ACER3Q9NUN7 267 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 EMC3Q9P0I2 261 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 WDR45Q9Y484 360 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 RNF115Q9Y4L5 304 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 NSD1Q96L73 2696 aaPredicted RBP11.54□□□□□ -0.56
RPAIN-202ENST00000381208 WDR91A4D1P6 747 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 E9PBE3 544 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 DNPH1O43598 174 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 ITM2AO43736 263 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 CYTIPO60759 359 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 SCN2BO60939 215 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 CYP7B1O75881 506 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 CD3EP07766 207 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 MAGEA8P43361 318 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 HTR3AP46098 478 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 OR3A2P47893 321 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 KHKP50053 298 aa11.54□□□□□ -0.56
RPAIN-202ENST00000381208 RPS26P62854 115 aaKnown RBP11.54□□□□□ -0.56
RPAIN-202ENST00000381208 ZNF844Q08AG5 666 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms