RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 THAP3Q8WTV1 239 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 SMAP2Q8WU79 429 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 RFKQ969G6 155 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 LRR1Q96L50 414 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 PRRX2Q99811 253 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 OR8D2Q9GZM6 311 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 ATP13A2Q9NQ11 1180 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 CLN6Q9NWW5 311 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 CLCA3PQ9Y6N3 262 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 BLACEA4D250 179 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 L7N2F9 121 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 GALR3O60755 368 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 SNRNP70P08621 437 aaKnown RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 ADRA2AP08913 450 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 GNSP15586 552 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 PCMT1P22061 227 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 FRKP42685 505 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 NUP107P57740 925 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 MXD1Q05195 221 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 TOP3AQ13472 1001 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 SLC38A4Q969I6 547 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 FAM131CQ96AQ9 280 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 MS4A4EQ96PG1 132 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 SPATA5L1Q9BVQ7 753 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 GPR61Q9BZJ8 451 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 OR51E2Q9H255 320 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 TOR4AQ9NXH8 423 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 PILRAQ9UKJ1 303 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 TMEM184BQ9Y519 407 aaPredicted RBP10.02□□□□□ -0.81
NEDD9-201ENST00000379433 CSNK1G3Q9Y6M4 447 aa10.02□□□□□ -0.81
NEDD9-201ENST00000379433 DENND4AQ7Z401 1863 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 SLC35F4A4IF30 521 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 PRKYO43930 277 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 SEC14L2O76054 403 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 SLC2A10O95528 541 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 RAB3DO95716 219 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 GPR75O95800 540 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 CLEC2LP0C7M8 214 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 SAGP10523 405 aaPredicted RBP10.01□□□□□ -0.81
NEDD9-201ENST00000379433 GADD45AP24522 165 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 DCKP27707 260 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 TSPAN5P62079 268 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 CSTF1Q05048 431 aaKnown RBP10.01□□□□□ -0.81
NEDD9-201ENST00000379433 ITGADQ13349 1161 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 Q5PR19 223 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 MRPL2Q5T653 305 aaKnown RBP10.01□□□□□ -0.81
NEDD9-201ENST00000379433 CMIPQ8IY22 773 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 KLHL36Q8N4N3 616 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 OR5M3Q8NGP4 307 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 RHOXF1Q8NHV9 184 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 RIT1Q92963 219 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 YTHDF1Q9BYJ9 559 aaKnown RBP10.01□□□□□ -0.81
NEDD9-201ENST00000379433 DPH1Q9BZG8 443 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 GABARAPL1Q9H0R8 117 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 ZC3H12DA2A288 527 aaKnown RBP10.01□□□□□ -0.81
NEDD9-201ENST00000379433 CLCA1A8K7I4 914 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 TMEM150CB9EJG8 249 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 ZNF217O75362 1048 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 LGI1O95970 557 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 AFF3P51826 1226 aaKnown RBP10.01□□□□□ -0.81
NEDD9-201ENST00000379433 INAVAQ3KP66 663 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 FLYWCH1Q4VC44 716 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 ARMCX4Q5H9R4 360 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 DCST2Q5T1A1 773 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 PDZK1Q5T2W1 519 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 CA13Q8N1Q1 262 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 VWA5B2Q8N398 1253 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 DNAJC22Q8N4W6 341 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 BBS10Q8TAM1 723 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 ZNF675Q8TD23 568 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 MUL1Q969V5 352 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 PLEKHA8Q96JA3 519 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 SDF2Q99470 211 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 MESP1Q9BRJ9 268 aa10.01□□□□□ -0.81
NEDD9-201ENST00000379433 A0A1W2PQ72 361 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 LOC390937A0A1W2PQ73 354 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 C17orf51A8MQB3 221 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 METTL12A8MUP2 240 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 LRRN3E7EW58 273 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 H7C1Q1 480 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 NDUFS8O00217 210 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 CPNE6O95741 557 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 CD27P26842 260 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 RPL35P42766 123 aaKnown RBP10□□□□□ -0.81
NEDD9-201ENST00000379433 LARS2Q15031 903 aaKnown RBP10□□□□□ -0.81
NEDD9-201ENST00000379433 TSTQ16762 297 aaKnown RBP10□□□□□ -0.81
NEDD9-201ENST00000379433 KLHL12Q53G59 568 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 VWA2Q5GFL6 755 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 FAM69BQ5VUD6 431 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 GTF2IRD2BQ6EKJ0 949 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 FRRS1Q6ZNA5 592 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 GTF2IRD2Q86UP8 949 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 PFN4Q8NHR9 129 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 RAB2BQ8WUD1 216 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 RASSF5Q8WWW0 418 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 ZHX1-C8orf76Q96EF9 292 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 SH3YL1Q96HL8 342 aaPredicted RBP10□□□□□ -0.81
NEDD9-201ENST00000379433 LRRN3Q9H3W5 708 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 MED20Q9H944 212 aa10□□□□□ -0.81
NEDD9-201ENST00000379433 MUTYHQ9UIF7 546 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms