RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 GAS1P54826 345 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 CLDN12P56749 244 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 AMZ1Q400G9 498 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ZNF628Q5EBL2 1059 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 ZNF425Q6IV72 752 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 Q6ZSR6 202 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 GPR135Q8IZ08 494 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 OR5J2Q8NH18 312 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 OR8K3Q8NH51 312 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 GHSRQ92847 366 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 UPRTQ96BW1 309 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 SERINC2Q96SA4 455 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 PDCD1LG2Q9BQ51 273 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 KCNE5Q9UJ90 142 aa11.98□□□□□ -0.49
USP11-204ENST00000377107 FAM172BPA6NC97 362 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 HRKO00198 91 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 HCRTR1O43613 425 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 DBIP07108 87 aaKnown RBP11.97□□□□□ -0.49
USP11-204ENST00000377107 HTR2BP41595 481 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 ZNHIT3Q15649 155 aaPredicted RBP11.97□□□□□ -0.49
USP11-204ENST00000377107 NDUFA5Q16718 116 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 PPP2R2DQ66LE6 453 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 NIPAL3Q6P499 406 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 VASH1Q7L8A9 365 aaPredicted RBP11.97□□□□□ -0.49
USP11-204ENST00000377107 IL17RCQ8NAC3 791 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 LILRB4Q8NHJ6 448 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 RBFOX1Q9NWB1 397 aaKnown RBP11.97□□□□□ -0.49
USP11-204ENST00000377107 ZNF346Q9UL40 294 aaKnown RBP11.97□□□□□ -0.49
USP11-204ENST00000377107 SLC9B1P1A6NJY1 282 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 K7EQS6 105 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 NDUFB5O43674 189 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 RFPL3O75679 317 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 SOX2P48431 317 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 CDK10Q15131 360 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 FAM205BPQ63HN1 556 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 GID4Q8IVV7 300 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 OR6C4Q8NGE1 309 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 PTP4A1Q93096 173 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 RFT1Q96AA3 541 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 WDFY2Q96P53 400 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 OR2A5Q96R48 311 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 SPRTNQ9H040 489 aaPredicted RBP11.97□□□□□ -0.49
USP11-204ENST00000377107 IRF2BPLQ9H1B7 796 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 MED28Q9H204 178 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 KIAA1671Q9BY89 1806 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 A0A1B0GWA3 101 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 HCN1O60741 890 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 EDNRAP25101 427 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 EMDP50402 254 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 ZNF136P52737 540 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 NR2C2APQ86WQ0 139 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 POGLUT1Q8NBL1 392 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 UXS1Q8NBZ7 420 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 OR8H1Q8NGG4 311 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 RLN3Q8WXF3 142 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 FOXN4Q96NZ1 517 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 ORAI3Q9BRQ5 295 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 PIGUQ9H490 435 aa11.97□□□□□ -0.49
USP11-204ENST00000377107 NUDT14O95848 222 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 DDOSTP39656 456 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 RPS27P42677 84 aaKnown RBP11.96□□□□□ -0.49
USP11-204ENST00000377107 LSSP48449 732 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 NTRK2Q16620 822 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 HES5Q5TA89 166 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 SFRP4Q6FHJ7 346 aaPredicted RBP11.96□□□□□ -0.49
USP11-204ENST00000377107 DGAT2L6Q6ZPD8 337 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 ABHD4Q8TB40 342 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 SPACA7Q96KW9 195 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 C10orf90Q96M02 699 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 CHIAQ9BZP6 476 aa11.96□□□□□ -0.49
USP11-204ENST00000377107 TCRBV21S2A2A0A5A6 115 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 ANKRD34BA5PLL1 514 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 GPR89AB7ZAQ6 455 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 PRICKLE3O43900 615 aaPredicted RBP11.96□□□□□ -0.5
USP11-204ENST00000377107 GPR75O95800 540 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 GPR89BP0CG08 455 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 EVI2BP34910 448 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 ARHGAP11BQ3KRB8 267 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 FBXO46Q6PJ61 603 aaPredicted RBP11.96□□□□□ -0.5
USP11-204ENST00000377107 SSX6Q7RTT6 188 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 AVL9Q8NBF6 648 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 OR5H6Q8NGV6 325 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 RSC1A1Q92681 617 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 SNAPC3Q92966 411 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 SOHLH2Q9NX45 425 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 MAU2Q9Y6X3 613 aa11.96□□□□□ -0.5
USP11-204ENST00000377107 TRBV2A0A0J9YWF9 115 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 IDSB3KWA1 339 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 SSNA1O43805 119 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 OR2B3O76000 313 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 AGR2O95994 175 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 NID1P14543 1247 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 ARSBP15848 533 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 HK1P19367 917 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 NDUFS1P28331 727 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 VASPP50552 380 aaPredicted RBP11.95□□□□□ -0.5
USP11-204ENST00000377107 CCR6P51684 374 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 ERVK-25P63136 954 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 GPR176Q14439 515 aa11.95□□□□□ -0.5
USP11-204ENST00000377107 Q5BKY6 102 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms