RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 NOSIPQ9Y314 301 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 EMC9Q9Y3B6 208 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 PIGBOS1A0A0B4J2F0 54 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ZNF749O43361 778 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 GPR19Q15760 415 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ZNF181Q2M3W8 571 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 PAPD4Q6PIY7 484 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 DPY19L4Q7Z388 723 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 TECPR1Q7Z6L1 1165 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 PXKQ7Z7A4 578 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 DDX31Q9H8H2 851 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 ANKRD10Q9NXR5 420 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 DDAH2O95865 285 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 CD34P28906 385 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 POLR2HP52434 150 aaKnown RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 LTB4RQ15722 352 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 FAM111BQ6SJ93 734 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 IFI44Q8TCB0 444 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 C16orf58Q96GQ5 468 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ZNF845Q96IR2 970 aaPredicted RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 SLC30A3Q99726 388 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 CALHM2Q9HA72 323 aa12.73□□□□□ -0.37
GPC6-201ENST00000377047 ACSS1Q9NUB1 689 aaPredicted RBP12.73□□□□□ -0.37
GPC6-201ENST00000377047 ATF4P18848 351 aaPredicted RBP12.72□□□□□ -0.37
GPC6-201ENST00000377047 MS4A2Q01362 244 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 C18orf63Q68DL7 685 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 VRK3Q8IV63 474 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ESX1Q8N693 406 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 IL17RDQ8NFM7 739 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 OR5D14Q8NGL3 314 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 FUNDC2Q9BWH2 189 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 FOLH1BQ9HBA9 442 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ADPRHP54922 357 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 HSD17B7P56937 341 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 RHEBQ15382 184 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ZADH2Q8N4Q0 377 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 VN1R3Q9BXE9 311 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 MBNL1Q9NR56 388 aaKnown RBP12.72□□□□□ -0.37
GPC6-201ENST00000377047 WIF1Q9Y5W5 379 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 TOXO94900 526 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ETV4P43268 484 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 HTR5AP47898 357 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 REEP5Q00765 189 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 CMTM1Q8IZ96 169 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 TEX10Q9NXF1 929 aaPredicted RBP12.72□□□□□ -0.37
GPC6-201ENST00000377047 TAS2R8Q9NYW2 309 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 IL37Q9NZH6 218 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 PRKRAO75569 313 aaKnown RBP12.72□□□□□ -0.37
GPC6-201ENST00000377047 DHRS4L1P0CG22 281 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ARL6IP1Q15041 203 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 SLC5A12Q1EHB4 618 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 TMEM64Q6YI46 380 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 TMEM178AQ8NBL3 297 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ZNF417Q8TAU3 575 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 PLEKHA3Q9HB20 300 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 TESQ9UGI8 421 aaKnown RBP12.72□□□□□ -0.37
GPC6-201ENST00000377047 J3KTA2 159 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 BMP2P12643 396 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ZNF44P15621 663 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 NCS1P62166 190 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 HYAL4Q2M3T9 481 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 PCGF3Q3KNV8 242 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 FAM57BQ71RH2 274 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ZNF695Q8IW36 515 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 CCDC74AQ96AQ1 378 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 ZNF597Q96LX8 424 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 EVA1AQ9H8M9 152 aa12.72□□□□□ -0.37
GPC6-201ENST00000377047 CREBL2O60519 120 aaPredicted RBP12.71□□□□□ -0.37
GPC6-201ENST00000377047 CD53P19397 219 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 GK3PQ14409 553 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 P2RY14Q15391 338 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 CENPSQ8N2Z9 138 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 ATP13A2Q9NQ11 1180 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 THSD1Q9NS62 852 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 OR14J1Q9UGF5 321 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 OR7A17O14581 309 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 HOXC11O43248 304 aaPredicted RBP12.71□□□□□ -0.37
GPC6-201ENST00000377047 CDK2P24941 298 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 AAED1Q7RTV5 226 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 LILRB2Q8N423 598 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 C4orf36Q96KX1 117 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 SLC6A20Q9NP91 592 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 MMP17Q9ULZ9 603 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.37
GPC6-201ENST00000377047 IL1F10Q8WWZ1 152 aa12.71□□□□□ -0.37
GPC6-201ENST00000377047 GABBR2O75899 941 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 UTS2O95399 124 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 MAOAP21397 527 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 TACR3P29371 465 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 PRSS3P35030 304 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 TMEM244Q5VVB8 128 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 PAPD5Q8NDF8 572 aaKnown RBP12.71□□□□□ -0.38
GPC6-201ENST00000377047 CPT1CQ8TCG5 803 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 PHIPQ8WWQ0 1821 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 PCP4L1A6NKN8 68 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 FAM183AA6NL82 134 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 ARNTLO00327 626 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 HMGA1P17096 107 aaKnown RBP12.71□□□□□ -0.38
GPC6-201ENST00000377047 GPR139Q6DWJ6 353 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms